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The map label for this gene is 20093672

Identifier: 20093672

GI number: 20093672

Start: 217843

End: 218598

Strand: Direct

Name: 20093672

Synonym: MK0232

Alternate gene names: NA

Gene position: 217843-218598 (Clockwise)

Preceding gene: 20093670

Following gene: 20093673

Centisome position: 12.85

GC content: 61.24

Gene sequence:

>756_bases
TTGTTCGTCAAGTTCGATTCGCACGTGCACCTGGATGTAAGATGTGAGGACGACATGAAGACCATGAGTCTCGCCGGAAT
ACGGTACGTCCTGACGCTAGCCCACGATCCCATGCCGTTCCGTACCGCGGAGGCCCTCTTGGGACACTGGGAGGCTGTCG
AGTCAACCGCGGAGACCGCGGTAGATTACCTGATCGACGCGAAGGTGGGACTGGGGGTACATCCGAGGGCCATCCCGGAC
GAGGGCCTCGAACTCGCCCTCGAACACCTCGAGTCGAAGCTGAGTGATCTGGACGCGGTAGGAGAGATCGGGCTGGAGGA
GGCCACAGACGAGGAGGTGAAGGTATTCCGGGAGCAGCTGGACCTCGCCGCGACCGAAGACGTACCCGTCGTCGTTCACA
CTCCCCGGAGTCGTGATCCGAACGTCATCTCGAAGATCATCGAGGTCGCCAGGGACTCGGATCTGCACCCCGACCTGATC
GTGATCGACCACCTCAACGAACAGTACGTCGACGCGGTCCTCGCGGAGGGTTTCAACGCCGGGATCACCGTGCAGCCCGG
TAAGGCGACCGTCGAGGAGGCCGTCGAGATAGTGACCAATCGAGCCGAACACGCGGACCGCATTCTTATCAACAGCGACG
CGTCGAGGGCCCTGAGTAACGTCTTAGCGGTGGCCGAGGTGGCGTTCGAGCTGGAAAAGAGGGGATTCGACGCCACCGAA
GCGGTGGTACGGGACAACGCCCTACAGCTTTTCTAA

Upstream 100 bases:

>100_bases
CCTCCTTCACGCTCTCTGCCATACTTGATGCACCCTCAATATAAGGAGGGATCCGGCTATTTAAACTCTAAGAAACAGAA
CCTCAAGGGGCGACGGAGCC

Downstream 100 bases:

>100_bases
CCCGGCACCCTCTTAACGCCGTCCCTCCCCGCCCACCCGGGGTGCGAACGTGCGGCTGGCTTTCATCGGAGGGACCGGCC
ATCAAGGGTTCGGACTCGCG

Product: metal-dependent hydrolase of the TIM-barrel fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MFVKFDSHVHLDVRCEDDMKTMSLAGIRYVLTLAHDPMPFRTAEALLGHWEAVESTAETAVDYLIDAKVGLGVHPRAIPD
EGLELALEHLESKLSDLDAVGEIGLEEATDEEVKVFREQLDLAATEDVPVVVHTPRSRDPNVISKIIEVARDSDLHPDLI
VIDHLNEQYVDAVLAEGFNAGITVQPGKATVEEAVEIVTNRAEHADRILINSDASRALSNVLAVAEVAFELEKRGFDATE
AVVRDNALQLF

Sequences:

>Translated_251_residues
MFVKFDSHVHLDVRCEDDMKTMSLAGIRYVLTLAHDPMPFRTAEALLGHWEAVESTAETAVDYLIDAKVGLGVHPRAIPD
EGLELALEHLESKLSDLDAVGEIGLEEATDEEVKVFREQLDLAATEDVPVVVHTPRSRDPNVISKIIEVARDSDLHPDLI
VIDHLNEQYVDAVLAEGFNAGITVQPGKATVEEAVEIVTNRAEHADRILINSDASRALSNVLAVAEVAFELEKRGFDATE
AVVRDNALQLF
>Mature_251_residues
MFVKFDSHVHLDVRCEDDMKTMSLAGIRYVLTLAHDPMPFRTAEALLGHWEAVESTAETAVDYLIDAKVGLGVHPRAIPD
EGLELALEHLESKLSDLDAVGEIGLEEATDEEVKVFREQLDLAATEDVPVVVHTPRSRDPNVISKIIEVARDSDLHPDLI
VIDHLNEQYVDAVLAEGFNAGITVQPGKATVEEAVEIVTNRAEHADRILINSDASRALSNVLAVAEVAFELEKRGFDATE
AVVRDNALQLF

Specific function: Unknown

COG id: COG1099

COG function: function code R; Predicted metal-dependent hydrolases with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0761 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR012022 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: NA

Molecular weight: Translated: 27577; Mature: 27577

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVKFDSHVHLDVRCEDDMKTMSLAGIRYVLTLAHDPMPFRTAEALLGHWEAVESTAETA
CEEEECCEEEEEEEECCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
VDYLIDAKVGLGVHPRAIPDEGLELALEHLESKLSDLDAVGEIGLEEATDEEVKVFREQL
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DLAATEDVPVVVHTPRSRDPNVISKIIEVARDSDLHPDLIVIDHLNEQYVDAVLAEGFNA
HHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCC
GITVQPGKATVEEAVEIVTNRAEHADRILINSDASRALSNVLAVAEVAFELEKRGFDATE
CEEECCCHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHH
AVVRDNALQLF
HHHHCCCHHCC
>Mature Secondary Structure
MFVKFDSHVHLDVRCEDDMKTMSLAGIRYVLTLAHDPMPFRTAEALLGHWEAVESTAETA
CEEEECCEEEEEEEECCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
VDYLIDAKVGLGVHPRAIPDEGLELALEHLESKLSDLDAVGEIGLEEATDEEVKVFREQL
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DLAATEDVPVVVHTPRSRDPNVISKIIEVARDSDLHPDLIVIDHLNEQYVDAVLAEGFNA
HHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCC
GITVQPGKATVEEAVEIVTNRAEHADRILINSDASRALSNVLAVAEVAFELEKRGFDATE
CEEECCCHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHH
AVVRDNALQLF
HHHHCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]