Click here to switch to the map view.

The map label for this gene is 20093654

Identifier: 20093654

GI number: 20093654

Start: 205420

End: 205839

Strand: Reverse

Name: 20093654

Synonym: MK0214

Alternate gene names: NA

Gene position: 205839-205420 (Counterclockwise)

Preceding gene: 20093655

Following gene: 20093653

Centisome position: 12.14

GC content: 55.24

Gene sequence:

>420_bases
TTGTCCGGCGTGAAAAGGGTAGAATTCGACGCGAGACTCCTGGACTCCCTCCTCGAGGCAAGCGATAAAAATCACCCTGA
TGAATTCTTCGCGATGTTAGGGGGCTCGATAGACGCGGAAACCATCACGATCGACTCGCTGATCGTAGTCCCTTTCGAAG
CCTCCGACTCCGGTGCGATTTTCGATCTCCTCTCCGTTCACACCTGCGACGTAATCGGAACGTTTCACTCCCATCCATAC
GGCGATCCGGTACCCTCGGAGGATGACTTGATGCTGTTCAAGAGGTTGGGGGCCGTCCACGCGATCGCAGCGTACCCGTA
TACTCCGGACCGTGTGGAGTTCTACGACAAGTCCGGCAGAAACATAACACCGGTCGTAGAAGTGAGATACACGGCCGATG
AAGAAGCGAACAACCGCTGA

Upstream 100 bases:

>100_bases
TTAGCCTTCGCGGGGATTGCAGTAATAGGCTGGTACGGTATTAGCCATATCATCGGCCCGCTAACCTCGCCGCTAAGAAG
ATCCGCGGAGGGAAGGCGGC

Downstream 100 bases:

>100_bases
CCTCACTATGACGATCCTGCGACCACTCCGAGGCCGGGATGAAGAGATCGAGGTAGGCCGACGAACCGGGATGACGACCC
CTGGGGTACTTGACCGTGTC

Product: metal-dependent protease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSGVKRVEFDARLLDSLLEASDKNHPDEFFAMLGGSIDAETITIDSLIVVPFEASDSGAIFDLLSVHTCDVIGTFHSHPY
GDPVPSEDDLMLFKRLGAVHAIAAYPYTPDRVEFYDKSGRNITPVVEVRYTADEEANNR

Sequences:

>Translated_139_residues
MSGVKRVEFDARLLDSLLEASDKNHPDEFFAMLGGSIDAETITIDSLIVVPFEASDSGAIFDLLSVHTCDVIGTFHSHPY
GDPVPSEDDLMLFKRLGAVHAIAAYPYTPDRVEFYDKSGRNITPVVEVRYTADEEANNR
>Mature_138_residues
SGVKRVEFDARLLDSLLEASDKNHPDEFFAMLGGSIDAETITIDSLIVVPFEASDSGAIFDLLSVHTCDVIGTFHSHPYG
DPVPSEDDLMLFKRLGAVHAIAAYPYTPDRVEFYDKSGRNITPVVEVRYTADEEANNR

Specific function: Unknown

COG id: COG1310

COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15365; Mature: 15234

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVKRVEFDARLLDSLLEASDKNHPDEFFAMLGGSIDAETITIDSLIVVPFEASDSGAI
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECEEEEEEECCCCCCCH
FDLLSVHTCDVIGTFHSHPYGDPVPSEDDLMLFKRLGAVHAIAAYPYTPDRVEFYDKSGR
HHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCHHHEEEECCCCCCCEEEECCCCC
NITPVVEVRYTADEEANNR
CCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
SGVKRVEFDARLLDSLLEASDKNHPDEFFAMLGGSIDAETITIDSLIVVPFEASDSGAI
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECEEEEEEECCCCCCCH
FDLLSVHTCDVIGTFHSHPYGDPVPSEDDLMLFKRLGAVHAIAAYPYTPDRVEFYDKSGR
HHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCHHHEEEECCCCCCCEEEECCCCC
NITPVVEVRYTADEEANNR
CCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA