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The map label for this gene is RecJ_1

Identifier: 20093644

GI number: 20093644

Start: 196414

End: 197445

Strand: Direct

Name: RecJ_1

Synonym: MK0204

Alternate gene names: NA

Gene position: 196414-197445 (Clockwise)

Preceding gene: 20093643

Following gene: 20093646

Centisome position: 11.59

GC content: 61.63

Gene sequence:

>1032_bases
TTGAAGCTGTATCCGTTAGTCCGTAAAGTGTTGAAGTTGCTGTCGTCGGCCGATTCCATCGGTATCATGGCTGATACCGA
TGCGGATGGCGTGTCGGGCGCAGCCACGCTCTGTGAAGCTTTCGGGGTAGCGGAGGACGACGTGTGGTTCCCCTCGGGAG
GCTTCTACGGAGTGCCTAAGGACGCGCTCCGCGACATGCTAGAAGACTACGACGTCGTCGTCACCGTGGATCTTACACCT
CCTCCCTTCCCGGAGGCTAGAGACAGGGTCGTGGTCATCGACCACCATCCCACGGACAGCCACTATCCGATGACTGTCAA
TCCGTACGAAATCCCAGCCCTCCCAACTCACACATCGGCGTCGGCTCTGGTCGGCATGCTCGCACACCGCACGGGAGGGC
TGAATCGACCGTGGGTCCCACTGATAGGAGCGGCCGGGGACGGTATGGAGGGAGGGGCCGTGTACGAGACGCTAGCCTCG
ATGACGGATCCGGGGTATCTGGTTCCGAGTAGGGGCCGGAACCTCACCCCGCTGCAGGACGCGGCGGCTACCGTGAACGC
GGCGCGTCGGGTGAAGTACGATGTAGGGGCCAGAGAAGCGCTGAAGGTGCTGATGTCGGCTGATTCCCCGTACGATGTGA
CGGAATCTCACCTACAGCGGTACCGAAAGCGAGTGAGGAAGCACCGGGCCATATGGTCGGGTGAGGCGGAGCGCACGGCG
CACATCGTGGAAGGGGTCGGTTACGCGGAGATCCACACCGAAGTGGACGTCGAAGGGTTGGTCGCCCGTGACCTCGTCGA
TCGATTGAACCTCAGATGCTCCGTGGTGGTCAACCTCGCCAGAAAACCGTGCGGTCTTTACAAGGCGAGCGGTAGGTCCC
AAGGCTTCCCGGTGAACGAGTTGATGGTGAAGATGGCGAGGTGGTTGGAAGGCTCCAAGGCCGGTGGACATCCCAACGCG
GCGGCGCTGCATTTCTCCGACGGTGATCCACGAGAGGCGTTCAATCGGGCCCTTGACCTGCTGCAGCCTTGA

Upstream 100 bases:

>100_bases
CCACTGAGAACGTCAAACGGATCGCGGACGTAGTACTCGACGCCGAGAACGGTGAGGGAGTCGCCACCTTCCTTCGGAAG
CTCCTCGAGGAGGTGGACGC

Downstream 100 bases:

>100_bases
TGAGGCCTACGAACGGCGGCGACGGGTCACCGGGACGGGACTTGAACTCCGGATGGAACTGTGTGCCAACGAAGTAAGGA
TGATCCGGCAGTTCGAGGGC

Product: single-stranded DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKLYPLVRKVLKLLSSADSIGIMADTDADGVSGAATLCEAFGVAEDDVWFPSGGFYGVPKDALRDMLEDYDVVVTVDLTP
PPFPEARDRVVVIDHHPTDSHYPMTVNPYEIPALPTHTSASALVGMLAHRTGGLNRPWVPLIGAAGDGMEGGAVYETLAS
MTDPGYLVPSRGRNLTPLQDAAATVNAARRVKYDVGAREALKVLMSADSPYDVTESHLQRYRKRVRKHRAIWSGEAERTA
HIVEGVGYAEIHTEVDVEGLVARDLVDRLNLRCSVVVNLARKPCGLYKASGRSQGFPVNELMVKMARWLEGSKAGGHPNA
AALHFSDGDPREAFNRALDLLQP

Sequences:

>Translated_343_residues
MKLYPLVRKVLKLLSSADSIGIMADTDADGVSGAATLCEAFGVAEDDVWFPSGGFYGVPKDALRDMLEDYDVVVTVDLTP
PPFPEARDRVVVIDHHPTDSHYPMTVNPYEIPALPTHTSASALVGMLAHRTGGLNRPWVPLIGAAGDGMEGGAVYETLAS
MTDPGYLVPSRGRNLTPLQDAAATVNAARRVKYDVGAREALKVLMSADSPYDVTESHLQRYRKRVRKHRAIWSGEAERTA
HIVEGVGYAEIHTEVDVEGLVARDLVDRLNLRCSVVVNLARKPCGLYKASGRSQGFPVNELMVKMARWLEGSKAGGHPNA
AALHFSDGDPREAFNRALDLLQP
>Mature_343_residues
MKLYPLVRKVLKLLSSADSIGIMADTDADGVSGAATLCEAFGVAEDDVWFPSGGFYGVPKDALRDMLEDYDVVVTVDLTP
PPFPEARDRVVVIDHHPTDSHYPMTVNPYEIPALPTHTSASALVGMLAHRTGGLNRPWVPLIGAAGDGMEGGAVYETLAS
MTDPGYLVPSRGRNLTPLQDAAATVNAARRVKYDVGAREALKVLMSADSPYDVTESHLQRYRKRVRKHRAIWSGEAERTA
HIVEGVGYAEIHTEVDVEGLVARDLVDRLNLRCSVVVNLARKPCGLYKASGRSQGFPVNELMVKMARWLEGSKAGGHPNA
AALHFSDGDPREAFNRALDLLQP

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37222; Mature: 37222

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYPLVRKVLKLLSSADSIGIMADTDADGVSGAATLCEAFGVAEDDVWFPSGGFYGVPK
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCH
DALRDMLEDYDVVVTVDLTPPPFPEARDRVVVIDHHPTDSHYPMTVNPYEIPALPTHTSA
HHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCHH
SALVGMLAHRTGGLNRPWVPLIGAAGDGMEGGAVYETLASMTDPGYLVPSRGRNLTPLQD
HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCHHH
AAATVNAARRVKYDVGAREALKVLMSADSPYDVTESHLQRYRKRVRKHRAIWSGEAERTA
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
HIVEGVGYAEIHTEVDVEGLVARDLVDRLNLRCSVVVNLARKPCGLYKASGRSQGFPVNE
HHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCEECCCCCCCCCHHH
LMVKMARWLEGSKAGGHPNAAALHFSDGDPREAFNRALDLLQP
HHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLYPLVRKVLKLLSSADSIGIMADTDADGVSGAATLCEAFGVAEDDVWFPSGGFYGVPK
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCH
DALRDMLEDYDVVVTVDLTPPPFPEARDRVVVIDHHPTDSHYPMTVNPYEIPALPTHTSA
HHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCHH
SALVGMLAHRTGGLNRPWVPLIGAAGDGMEGGAVYETLASMTDPGYLVPSRGRNLTPLQD
HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCHHH
AAATVNAARRVKYDVGAREALKVLMSADSPYDVTESHLQRYRKRVRKHRAIWSGEAERTA
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
HIVEGVGYAEIHTEVDVEGLVARDLVDRLNLRCSVVVNLARKPCGLYKASGRSQGFPVNE
HHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCEECCCCCCCCCHHH
LMVKMARWLEGSKAGGHPNAAALHFSDGDPREAFNRALDLLQP
HHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA