Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093635

Identifier: 20093635

GI number: 20093635

Start: 189564

End: 190313

Strand: Reverse

Name: 20093635

Synonym: MK0195

Alternate gene names: NA

Gene position: 190313-189564 (Counterclockwise)

Preceding gene: 20093636

Following gene: 20093634

Centisome position: 11.23

GC content: 60.53

Gene sequence:

>750_bases
TTGCTATCTGGGGATGAGACCCTGACGGTGTACCTCGCCAGGGTACTCTCCTGTCCCGAGCTGTTCCGTGTAAGTACTCC
GGAGGAGGCACGGCGGATCGCCGAGAAGATCTTGAGCGGGGAGATCGAACCTCCCCTGGAGTTCTTCGGACTGCGCCGGG
ATGCCGTCAATGAAGTTCTCGCGGTGACCGACGGGCCGGCGGGTGAAAACGTAGCACCTGTGGGGCTGCGCGTGCGCGGG
GATTCCATCGTCGTGAACCTGTACCCGGGCTCTCGTACCTACGAGAACTTCGTTCGAACCGAAGAGCTCACCGCGTGTAT
AGTACCTGATCCCATCCGCTTCTTGAAAGCGCTGTCGAAGGAGTTGGCTATCGAGACCGTCGGGGACGGGACCAAGGTCG
CGGAGGGGACCAGGGCTTACCTTGAGCTGGAAGCTAAGGAGATCCACGAAGGGAAACCGCTGACGGCGGAGTTGCAGGTT
GTAGGGTGGGGGCTCCTCCACCCCCGTCCCCGAGCTCTAGTCCGGGGTGAGTCCGCCTTACTGGAAGCGCTCGTGGAGTT
GACTCGAATCCACTTAGATGAGGACCACGTGGACGCCTGCAAAAGGGCTCTGGAAGTCGTCAAGAGGACGATTTGGAGTG
AGGAGTACCAGTGGGCCGTCGAGAAAGTCGAACGAGAGCTACGGGGGAAAGAGGATGGGCCGGATCATCAGGATACCAGT
CCACGGATTCGTCGAGCTACAGGGGGCTGA

Upstream 100 bases:

>100_bases
CCGAAACCCGAGCCCTCTATGAGCTCGACCGTGAGTTACACGAGGATGGTATAAACCCAGGCTCGACGGCCGATCTGTTG
GCGGCGGGGGTAGGGTACGC

Downstream 100 bases:

>100_bases
GGAGCGCGTACTGGACTCACCCGAAGTCCAACGGTTGAGGAGAGTCCGGCAGTTGGGTCTCGCGGAGCTGGTATACCCTG
GCGCCACCCACACGAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLSGDETLTVYLARVLSCPELFRVSTPEEARRIAEKILSGEIEPPLEFFGLRRDAVNEVLAVTDGPAGENVAPVGLRVRG
DSIVVNLYPGSRTYENFVRTEELTACIVPDPIRFLKALSKELAIETVGDGTKVAEGTRAYLELEAKEIHEGKPLTAELQV
VGWGLLHPRPRALVRGESALLEALVELTRIHLDEDHVDACKRALEVVKRTIWSEEYQWAVEKVERELRGKEDGPDHQDTS
PRIRRATGG

Sequences:

>Translated_249_residues
MLSGDETLTVYLARVLSCPELFRVSTPEEARRIAEKILSGEIEPPLEFFGLRRDAVNEVLAVTDGPAGENVAPVGLRVRG
DSIVVNLYPGSRTYENFVRTEELTACIVPDPIRFLKALSKELAIETVGDGTKVAEGTRAYLELEAKEIHEGKPLTAELQV
VGWGLLHPRPRALVRGESALLEALVELTRIHLDEDHVDACKRALEVVKRTIWSEEYQWAVEKVERELRGKEDGPDHQDTS
PRIRRATGG
>Mature_249_residues
MLSGDETLTVYLARVLSCPELFRVSTPEEARRIAEKILSGEIEPPLEFFGLRRDAVNEVLAVTDGPAGENVAPVGLRVRG
DSIVVNLYPGSRTYENFVRTEELTACIVPDPIRFLKALSKELAIETVGDGTKVAEGTRAYLELEAKEIHEGKPLTAELQV
VGWGLLHPRPRALVRGESALLEALVELTRIHLDEDHVDACKRALEVVKRTIWSEEYQWAVEKVERELRGKEDGPDHQDTS
PRIRRATGG

Specific function: Unknown

COG id: COG2457

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27712; Mature: 27712

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGDETLTVYLARVLSCPELFRVSTPEEARRIAEKILSGEIEPPLEFFGLRRDAVNEVL
CCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHEE
AVTDGPAGENVAPVGLRVRGDSIVVNLYPGSRTYENFVRTEELTACIVPDPIRFLKALSK
EECCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHH
ELAIETVGDGTKVAEGTRAYLELEAKEIHEGKPLTAELQVVGWGLLHPRPRALVRGESAL
HHHHHCCCCCCHHCCCCHHHEEEEHHHHCCCCCCEEEEEEEEEECCCCCCHHHHCCHHHH
LEALVELTRIHLDEDHVDACKRALEVVKRTIWSEEYQWAVEKVERELRGKEDGPDHQDTS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PRIRRATGG
CHHHCCCCC
>Mature Secondary Structure
MLSGDETLTVYLARVLSCPELFRVSTPEEARRIAEKILSGEIEPPLEFFGLRRDAVNEVL
CCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHEE
AVTDGPAGENVAPVGLRVRGDSIVVNLYPGSRTYENFVRTEELTACIVPDPIRFLKALSK
EECCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHH
ELAIETVGDGTKVAEGTRAYLELEAKEIHEGKPLTAELQVVGWGLLHPRPRALVRGESAL
HHHHHCCCCCCHHCCCCHHHEEEEHHHHCCCCCCEEEEEEEEEECCCCCCHHHHCCHHHH
LEALVELTRIHLDEDHVDACKRALEVVKRTIWSEEYQWAVEKVERELRGKEDGPDHQDTS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PRIRRATGG
CHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA