| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is CbiQ
Identifier: 20093621
GI number: 20093621
Start: 175784
End: 176476
Strand: Direct
Name: CbiQ
Synonym: MK0181
Alternate gene names: NA
Gene position: 175784-176476 (Clockwise)
Preceding gene: 20093620
Following gene: 20093622
Centisome position: 10.37
GC content: 61.47
Gene sequence:
>693_bases GTGAGGTTCACCGAAGCACTGGAGTGGTCGCTGACGGCTGAGACCGTGCTCCACCGTATACACCCATGGTCGAAGTTAGT CGGGCTGATGACCACGATCTTCGCCTCGATGTTACTGTACGATCCCGAGAGCATCGCCATCCTGTCGATACCGTACCTAA TCGGGTGCATCTTAGCCCGCGTTCCCGTCCGGATCCTAGCGCGGTTGTCGATACCGCCGATGGCGTTCTTGGGCGCGGTC CTGCTCCTGATGTTGCCCTCGGGCGTCCCGGGCCGCGAGGTGTTGCTGTACGCCGTTCGGGGCGCGACCGATCTCTTAGC CGTGCTCGTGACGACGCTGACGACGCCCTTCAACGCGCTGTGGTCGGCCCTCGTCGTGGTGTTCCCACCCACGCTGGCGG AGACCGGTCTCATCTTCCATCGCTCGGTGTACCGGGCGTTCGAAGAGTTGGAGGGAACGTTGAACGCGATCCGGATCCGG GGATGGAGGCTCAGGTCGATCAACGTTCTGGGATCCGTTATCGCGACTCTCTTGATTCGAAGCCACCGGAGCGCGGAACT CGTGCAGGTAAGCGTGGAGGTACGCGGGGCGACGGGTAGGGTGCGACCGTTGAAAAGATTCGAGTTCACGCGGATAGACT TCGGATGGTTGACCATGGTGTTTTGCTCCGTGGCGTTATCGGGGGTGGTCTGA
Upstream 100 bases:
>100_bases TGACCACGGTTTGGATAGTCACGGCGATCATCGAAGCCGTAATTACGGCATCGATGGTTAAGGCTCTCGCCCAAATGAAA CCGGACTGGGTGAGAGATCT
Downstream 100 bases:
>100_bases AATCGGGTATGCCGTTAAGATCAAATGCTTGACTCACGAGTATCCCGACGGCACTTGTGCTGTGTGCGGGTTGAGTCTAC GAGTGAAAGAAGGTGAGTCC
Product: ABC-type cobalt transport system, permease component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MRFTEALEWSLTAETVLHRIHPWSKLVGLMTTIFASMLLYDPESIAILSIPYLIGCILARVPVRILARLSIPPMAFLGAV LLLMLPSGVPGREVLLYAVRGATDLLAVLVTTLTTPFNALWSALVVVFPPTLAETGLIFHRSVYRAFEELEGTLNAIRIR GWRLRSINVLGSVIATLLIRSHRSAELVQVSVEVRGATGRVRPLKRFEFTRIDFGWLTMVFCSVALSGVV
Sequences:
>Translated_230_residues MRFTEALEWSLTAETVLHRIHPWSKLVGLMTTIFASMLLYDPESIAILSIPYLIGCILARVPVRILARLSIPPMAFLGAV LLLMLPSGVPGREVLLYAVRGATDLLAVLVTTLTTPFNALWSALVVVFPPTLAETGLIFHRSVYRAFEELEGTLNAIRIR GWRLRSINVLGSVIATLLIRSHRSAELVQVSVEVRGATGRVRPLKRFEFTRIDFGWLTMVFCSVALSGVV >Mature_230_residues MRFTEALEWSLTAETVLHRIHPWSKLVGLMTTIFASMLLYDPESIAILSIPYLIGCILARVPVRILARLSIPPMAFLGAV LLLMLPSGVPGREVLLYAVRGATDLLAVLVTTLTTPFNALWSALVVVFPPTLAETGLIFHRSVYRAFEELEGTLNAIRIR GWRLRSINVLGSVIATLLIRSHRSAELVQVSVEVRGATGRVRPLKRFEFTRIDFGWLTMVFCSVALSGVV
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25482; Mature: 25482
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFTEALEWSLTAETVLHRIHPWSKLVGLMTTIFASMLLYDPESIAILSIPYLIGCILAR CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHH VPVRILARLSIPPMAFLGAVLLLMLPSGVPGREVLLYAVRGATDLLAVLVTTLTTPFNAL HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHH WSALVVVFPPTLAETGLIFHRSVYRAFEELEGTLNAIRIRGWRLRSINVLGSVIATLLIR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH SHRSAELVQVSVEVRGATGRVRPLKRFEFTRIDFGWLTMVFCSVALSGVV CCCCCEEEEEEEEEECCCCCCCHHHHHHEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFTEALEWSLTAETVLHRIHPWSKLVGLMTTIFASMLLYDPESIAILSIPYLIGCILAR CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHH VPVRILARLSIPPMAFLGAVLLLMLPSGVPGREVLLYAVRGATDLLAVLVTTLTTPFNAL HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHH WSALVVVFPPTLAETGLIFHRSVYRAFEELEGTLNAIRIRGWRLRSINVLGSVIATLLIR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH SHRSAELVQVSVEVRGATGRVRPLKRFEFTRIDFGWLTMVFCSVALSGVV CCCCCEEEEEEEEEECCCCCCCHHHHHHEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA