Click here to switch to the map view.

The map label for this gene is 20093612

Identifier: 20093612

GI number: 20093612

Start: 168617

End: 169261

Strand: Reverse

Name: 20093612

Synonym: MK0172

Alternate gene names: NA

Gene position: 169261-168617 (Counterclockwise)

Preceding gene: 20093613

Following gene: 20093603

Centisome position: 9.99

GC content: 64.19

Gene sequence:

>645_bases
GTGCTGAGAGTCCTGCTCATATATCCCCGATCGCTCCGGTACTTCGTGATCCGAGCGTATCGTGAGCTCCCGTCGACGGT
TAAGCCAGATTCTCCGGTGCTCCTGGCTAGTTGTGACGCCGTCCGGGCCACGTACACGCGCCTCGAAGGTAACGTTGTGA
CCGTGGAGATCGGGGCCGCTCGGAACTTCCAAGAAGTCAAGGCTTCCCTGGCCCACGAGCTCGCCCACGTGCTGCAGTTC
GAGCACGGTGTAATGCCGATCGGTGGGTTACCGCCACTTCGGGCTCTGGCCCTTCCTCTCGAGGTCGGTGCGGAGGAGCT
AGTGTTGCAGGAGCTTCCGGACGTGGCCGTTCGCCGCCTCGAGATGGGTCTCCGGCGCGTGACCGGGTGCCGAACCGACG
ACCCGCTCTCGGAACTCGAAAGGTCCCTGGTTCTGGAACCGCTGAGATTGGCCGCGGAACGTCTGGACGTTCCGCTCTAC
GTGCCCGAGGTGGAACCCGAACACCCCGAGGTGGCTAAGGTCAAGAAGCGGCTCCTCCGCCGCGTCCGAAGGATCGATCC
CTGGAGCCCCCTGGAGGTGCAGCGTTACCTCGAGGACGCCTGGGCCGAGGTTACGGTCCTTGCAACTCTCTCGCGAGGCG
CCTGA

Upstream 100 bases:

>100_bases
ACGCCGACGCAGCTCTCGCGGCTTCGATCTTCCACTATGGGAAATTCACGATCGAAGAGGTGAAGGAGCACCTGGCCGAA
AGGGGTGTTCGGGTCAGACA

Downstream 100 bases:

>100_bases
GACGTTCGACCCTCTTCTCGACCGGCGGATGAGTGCTGAACAGTCGGAGTAGGCCTCCGCGGAACGGGTTCTCGATCCAC
AGGTGCGCCGTTGAGACTTC

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLRVLLIYPRSLRYFVIRAYRELPSTVKPDSPVLLASCDAVRATYTRLEGNVVTVEIGAARNFQEVKASLAHELAHVLQF
EHGVMPIGGLPPLRALALPLEVGAEELVLQELPDVAVRRLEMGLRRVTGCRTDDPLSELERSLVLEPLRLAAERLDVPLY
VPEVEPEHPEVAKVKKRLLRRVRRIDPWSPLEVQRYLEDAWAEVTVLATLSRGA

Sequences:

>Translated_214_residues
MLRVLLIYPRSLRYFVIRAYRELPSTVKPDSPVLLASCDAVRATYTRLEGNVVTVEIGAARNFQEVKASLAHELAHVLQF
EHGVMPIGGLPPLRALALPLEVGAEELVLQELPDVAVRRLEMGLRRVTGCRTDDPLSELERSLVLEPLRLAAERLDVPLY
VPEVEPEHPEVAKVKKRLLRRVRRIDPWSPLEVQRYLEDAWAEVTVLATLSRGA
>Mature_214_residues
MLRVLLIYPRSLRYFVIRAYRELPSTVKPDSPVLLASCDAVRATYTRLEGNVVTVEIGAARNFQEVKASLAHELAHVLQF
EHGVMPIGGLPPLRALALPLEVGAEELVLQELPDVAVRRLEMGLRRVTGCRTDDPLSELERSLVLEPLRLAAERLDVPLY
VPEVEPEHPEVAKVKKRLLRRVRRIDPWSPLEVQRYLEDAWAEVTVLATLSRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24134; Mature: 24134

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVLLIYPRSLRYFVIRAYRELPSTVKPDSPVLLASCDAVRATYTRLEGNVVTVEIGAA
CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCC
RNFQEVKASLAHELAHVLQFEHGVMPIGGLPPLRALALPLEVGAEELVLQELPDVAVRRL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
EMGLRRVTGCRTDDPLSELERSLVLEPLRLAAERLDVPLYVPEVEPEHPEVAKVKKRLLR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHH
RVRRIDPWSPLEVQRYLEDAWAEVTVLATLSRGA
HHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MLRVLLIYPRSLRYFVIRAYRELPSTVKPDSPVLLASCDAVRATYTRLEGNVVTVEIGAA
CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCC
RNFQEVKASLAHELAHVLQFEHGVMPIGGLPPLRALALPLEVGAEELVLQELPDVAVRRL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
EMGLRRVTGCRTDDPLSELERSLVLEPLRLAAERLDVPLYVPEVEPEHPEVAKVKKRLLR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHH
RVRRIDPWSPLEVQRYLEDAWAEVTVLATLSRGA
HHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA