Click here to switch to the map view.

The map label for this gene is 20093597

Identifier: 20093597

GI number: 20093597

Start: 156089

End: 158347

Strand: Direct

Name: 20093597

Synonym: MK0157

Alternate gene names: NA

Gene position: 156089-158347 (Clockwise)

Preceding gene: 20093596

Following gene: 20093604

Centisome position: 9.21

GC content: 61.04

Gene sequence:

>2259_bases
TTGCCGCGCGAGAAGTGTCCTAAATGTGACGGGAAGGGGAAGATCCCAGTCGGAGAGACCGAATGTCCCAGATGCGGTGG
TACCGGGTTCGTGGGCGACGTGGACATCAGCGAGCACTTCAAAGGAGCGGCTCAGCACGCCGTCGAAGGGTACGATCTCG
CCAGCTCACGTGACGTCCCCTGTCCGAAGTGTCAGGGTAAAGGTGTGATAACGGTCTACGAGGAATGCGACAGGTGCGGT
GGTACCGGTTACATCGTGAAGTGTCGGGAGTGCGGGAAGGAACTGGATCCAGACGTTGAAGAGGACCTATGCGAGGAGTG
CCGGAAGAAGATCAAACAGATTCGCAAGGAAAAGCTGCCAAAGGTGAAGGTCCTCTCGCCGGCGTGCGGGTACGAGGACG
TCGAAGAGGGCGAGCTGTACAAGGGCAAGGTTAGCCGTGTCGAGAAGTACGGAGTTTTCATCGAATTAAACGACAGAACC
CTCGGTCTGCTACACCGTCGCGATATGGGCGACAAGGAGCCTCAGGACTTCTCGATCGGTGACGAGGTGGTGGTGAAGGT
CACGGACGTGCGACCGGAGGACGGCGAGATCGACTTCACGATCGAAGGTATCGACCCACGGCCCGATCGATACCGCGAGG
AGGTCGTGGAGAAGGAGCTGAAGCGCGTACTCGTACACGACATCGACGAATCGAAGATCGGCGAGACCGTCCTGATTAAA
GGTAAGATCATCCACGTCCAGCAGACACCCGGACCGACCGTATTCACGCTACGAGACGAGAGCGGTAGCATCTGGATGGC
AGCCTTCGAGGGGCCGGGGATCAGGGCCTATCCGGACATCGAGGCGGGTGATTACGTCCGGGTGATCGGCGAGGTCACCA
CGCACGACGGCCAGCTCCAGGTCGAGATCCTCGACATGGAGAAGCTCGTGGGGACGGAGAAAGTCGAGATCAAACGAGCC
ATCGACGAGGCGCTCGACCGGGAAGCCGAGCCGCCCGAGGATCTAAAACCCATGGTAGACAGCGAGATCATCGAGCGTCT
GTGGCCGCGGATGCGCGAGGTGGCGAAGGAGATCAAGCGGGCCGTACTCGAAGGTCGGCCCGTCCTGATCCGGCACCACG
CGGACGCCGACGGTATCTCGGGCGGAGTAGCGCTGGAGGAGGCGATACTCCCGATCTTGAGGGAGAACAACCCGGACCCG
GAGGCAGAGTACCACTTCTACAAGCGGTTCCCGAACAAGGCGCCGATATACACCCTCGAGGACGCCTCACGGGACCTGAA
CCACGCCCTAGAGGACGTCCACAGGTACGGCCATCAGGTACCACTCCTGGTACTCTTGGACATCGGGTGTACCGAGGAGG
ACGTACCCGCCATCGAGGAAATGAAGGCCTACGGCGTCGACGTCCTGGTCATCGACCACCACTATCCGGGCGAAGCCGTG
GGAGAGAACCCGGAGGACGGACTGAAGGAGTTCCCGATCGACGAACACGTGAAGGTACACGTGAACCCCTACGCGGCGGG
TGGCGACGGCAAGAACATCCCCGCAGGTGTCCTGGCCGTAGAGATCGCCCGACTCATCAACCCGGAGGTGGAGGACAGGA
TTAAGCACCTCCCGGCGGTCGCGTGTCTGGGGGACCACGCCGAGTCTCCCGAGGCGGAGCAGTACCTCGAGATCGCCGAG
GAGGCCGGTTTCGACAGGAAGTGGCTGAGGAAGATCGCGGACAGCGTCGACTTCCAGGCGTTCCAGCTGCGTCACACTCC
GGGGAGGCACCTGATGAACGACGTTCTCGGCACTACAGGGGACGAACACCGACACCGACGGCTGGTAGAGAACCTCTACA
AGCAGCATAAGATCGCCTGCGAGCGGCAGCTGGAAGCCGCGCTGAAGGGAGTCAAGGAGTACGAGACGGACGGTGTGAAG
GTGGTCACCTTAGACGTGGAGAAGCACGCCCGCAAGTTCGAGTACCCCGGCCCGGGCAAGACGTGCGGGCTCGTCCACGA
CCTGAAGGTCGAGGAAGAAGGCGACGATGCAAAGGTAGTGACCATCGCGTACGGACCGGACTTCGCGGTGATCAGGGCCA
CGGAGAACCTGGGGATAAACCTCAACGATATCGTATCGGAACTGGAGGAAGAGATGCCAGAGGCCGCGGTGGAGGGTGGA
GGTCACGAGACCGCCGGCTCGATATCGTTCGTGGAGGCACATCGGAACAAGGTCCTCAAGGCGCTGGTCGAGAAGATCCT
GAGGGACGCCACCTCTTAA

Upstream 100 bases:

>100_bases
ACATCCGGGTTTGTCGGAGGAGGACCGTCAGGACGTTGTGGAAGCCGTTGAGAAGGTCGTTTCCGCGTTTTCCCGATAGG
CTCACACGAGGGGAACGCGC

Downstream 100 bases:

>100_bases
CCTACACGCACGCATTTCACGATAAGCCGCTCGCGCGCCGTGGAAAGAGGCGTGCAAGTGACCAACCACAGCTCGTCCTT
ATTCGACGCATCCGGGTCGA

Product: RecJ-like exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 752; Mature: 751

Protein sequence:

>752_residues
MPREKCPKCDGKGKIPVGETECPRCGGTGFVGDVDISEHFKGAAQHAVEGYDLASSRDVPCPKCQGKGVITVYEECDRCG
GTGYIVKCRECGKELDPDVEEDLCEECRKKIKQIRKEKLPKVKVLSPACGYEDVEEGELYKGKVSRVEKYGVFIELNDRT
LGLLHRRDMGDKEPQDFSIGDEVVVKVTDVRPEDGEIDFTIEGIDPRPDRYREEVVEKELKRVLVHDIDESKIGETVLIK
GKIIHVQQTPGPTVFTLRDESGSIWMAAFEGPGIRAYPDIEAGDYVRVIGEVTTHDGQLQVEILDMEKLVGTEKVEIKRA
IDEALDREAEPPEDLKPMVDSEIIERLWPRMREVAKEIKRAVLEGRPVLIRHHADADGISGGVALEEAILPILRENNPDP
EAEYHFYKRFPNKAPIYTLEDASRDLNHALEDVHRYGHQVPLLVLLDIGCTEEDVPAIEEMKAYGVDVLVIDHHYPGEAV
GENPEDGLKEFPIDEHVKVHVNPYAAGGDGKNIPAGVLAVEIARLINPEVEDRIKHLPAVACLGDHAESPEAEQYLEIAE
EAGFDRKWLRKIADSVDFQAFQLRHTPGRHLMNDVLGTTGDEHRHRRLVENLYKQHKIACERQLEAALKGVKEYETDGVK
VVTLDVEKHARKFEYPGPGKTCGLVHDLKVEEEGDDAKVVTIAYGPDFAVIRATENLGINLNDIVSELEEEMPEAAVEGG
GHETAGSISFVEAHRNKVLKALVEKILRDATS

Sequences:

>Translated_752_residues
MPREKCPKCDGKGKIPVGETECPRCGGTGFVGDVDISEHFKGAAQHAVEGYDLASSRDVPCPKCQGKGVITVYEECDRCG
GTGYIVKCRECGKELDPDVEEDLCEECRKKIKQIRKEKLPKVKVLSPACGYEDVEEGELYKGKVSRVEKYGVFIELNDRT
LGLLHRRDMGDKEPQDFSIGDEVVVKVTDVRPEDGEIDFTIEGIDPRPDRYREEVVEKELKRVLVHDIDESKIGETVLIK
GKIIHVQQTPGPTVFTLRDESGSIWMAAFEGPGIRAYPDIEAGDYVRVIGEVTTHDGQLQVEILDMEKLVGTEKVEIKRA
IDEALDREAEPPEDLKPMVDSEIIERLWPRMREVAKEIKRAVLEGRPVLIRHHADADGISGGVALEEAILPILRENNPDP
EAEYHFYKRFPNKAPIYTLEDASRDLNHALEDVHRYGHQVPLLVLLDIGCTEEDVPAIEEMKAYGVDVLVIDHHYPGEAV
GENPEDGLKEFPIDEHVKVHVNPYAAGGDGKNIPAGVLAVEIARLINPEVEDRIKHLPAVACLGDHAESPEAEQYLEIAE
EAGFDRKWLRKIADSVDFQAFQLRHTPGRHLMNDVLGTTGDEHRHRRLVENLYKQHKIACERQLEAALKGVKEYETDGVK
VVTLDVEKHARKFEYPGPGKTCGLVHDLKVEEEGDDAKVVTIAYGPDFAVIRATENLGINLNDIVSELEEEMPEAAVEGG
GHETAGSISFVEAHRNKVLKALVEKILRDATS
>Mature_751_residues
PREKCPKCDGKGKIPVGETECPRCGGTGFVGDVDISEHFKGAAQHAVEGYDLASSRDVPCPKCQGKGVITVYEECDRCGG
TGYIVKCRECGKELDPDVEEDLCEECRKKIKQIRKEKLPKVKVLSPACGYEDVEEGELYKGKVSRVEKYGVFIELNDRTL
GLLHRRDMGDKEPQDFSIGDEVVVKVTDVRPEDGEIDFTIEGIDPRPDRYREEVVEKELKRVLVHDIDESKIGETVLIKG
KIIHVQQTPGPTVFTLRDESGSIWMAAFEGPGIRAYPDIEAGDYVRVIGEVTTHDGQLQVEILDMEKLVGTEKVEIKRAI
DEALDREAEPPEDLKPMVDSEIIERLWPRMREVAKEIKRAVLEGRPVLIRHHADADGISGGVALEEAILPILRENNPDPE
AEYHFYKRFPNKAPIYTLEDASRDLNHALEDVHRYGHQVPLLVLLDIGCTEEDVPAIEEMKAYGVDVLVIDHHYPGEAVG
ENPEDGLKEFPIDEHVKVHVNPYAAGGDGKNIPAGVLAVEIARLINPEVEDRIKHLPAVACLGDHAESPEAEQYLEIAEE
AGFDRKWLRKIADSVDFQAFQLRHTPGRHLMNDVLGTTGDEHRHRRLVENLYKQHKIACERQLEAALKGVKEYETDGVKV
VTLDVEKHARKFEYPGPGKTCGLVHDLKVEEEGDDAKVVTIAYGPDFAVIRATENLGINLNDIVSELEEEMPEAAVEGGG
HETAGSISFVEAHRNKVLKALVEKILRDATS

Specific function: Unknown

COG id: COG1107

COG function: function code L; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001305
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365
- InterPro:   IPR001667
- InterPro:   IPR003029
- InterPro:   IPR022967 [H]

Pfam domain/function: PF01368 DHH; PF00575 S1; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 83865; Mature: 83734

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPREKCPKCDGKGKIPVGETECPRCGGTGFVGDVDISEHFKGAAQHAVEGYDLASSRDVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCC
CPKCQGKGVITVYEECDRCGGTGYIVKCRECGKELDPDVEEDLCEECRKKIKQIRKEKLP
CCCCCCCCEEEEHHHHHCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
KVKVLSPACGYEDVEEGELYKGKVSRVEKYGVFIELNDRTLGLLHRRDMGDKEPQDFSIG
CEEEECCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCEEEHHHHCCCCCCCCCCCCCC
DEVVVKVTDVRPEDGEIDFTIEGIDPRPDRYREEVVEKELKRVLVHDIDESKIGETVLIK
CEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEE
GKIIHVQQTPGPTVFTLRDESGSIWMAAFEGPGIRAYPDIEAGDYVRVIGEVTTHDGQLQ
EEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEHCCCCCEEE
VEILDMEKLVGTEKVEIKRAIDEALDREAEPPEDLKPMVDSEIIERLWPRMREVAKEIKR
EEEECHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLEGRPVLIRHHADADGISGGVALEEAILPILRENNPDPEAEYHFYKRFPNKAPIYTLE
HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEC
DASRDLNHALEDVHRYGHQVPLLVLLDIGCTEEDVPAIEEMKAYGVDVLVIDHHYPGEAV
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCC
GENPEDGLKEFPIDEHVKVHVNPYAAGGDGKNIPAGVLAVEIARLINPEVEDRIKHLPAV
CCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCHH
ACLGDHAESPEAEQYLEIAEEAGFDRKWLRKIADSVDFQAFQLRHTPGRHLMNDVLGTTG
HEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC
DEHRHRRLVENLYKQHKIACERQLEAALKGVKEYETDGVKVVTLDVEKHARKFEYPGPGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCCCCC
TCGLVHDLKVEEEGDDAKVVTIAYGPDFAVIRATENLGINLNDIVSELEEEMPEAAVEGG
CCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
GHETAGSISFVEAHRNKVLKALVEKILRDATS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PREKCPKCDGKGKIPVGETECPRCGGTGFVGDVDISEHFKGAAQHAVEGYDLASSRDVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCC
CPKCQGKGVITVYEECDRCGGTGYIVKCRECGKELDPDVEEDLCEECRKKIKQIRKEKLP
CCCCCCCCEEEEHHHHHCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
KVKVLSPACGYEDVEEGELYKGKVSRVEKYGVFIELNDRTLGLLHRRDMGDKEPQDFSIG
CEEEECCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCEEEHHHHCCCCCCCCCCCCCC
DEVVVKVTDVRPEDGEIDFTIEGIDPRPDRYREEVVEKELKRVLVHDIDESKIGETVLIK
CEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEE
GKIIHVQQTPGPTVFTLRDESGSIWMAAFEGPGIRAYPDIEAGDYVRVIGEVTTHDGQLQ
EEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEHCCCCCEEE
VEILDMEKLVGTEKVEIKRAIDEALDREAEPPEDLKPMVDSEIIERLWPRMREVAKEIKR
EEEECHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLEGRPVLIRHHADADGISGGVALEEAILPILRENNPDPEAEYHFYKRFPNKAPIYTLE
HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEC
DASRDLNHALEDVHRYGHQVPLLVLLDIGCTEEDVPAIEEMKAYGVDVLVIDHHYPGEAV
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCC
GENPEDGLKEFPIDEHVKVHVNPYAAGGDGKNIPAGVLAVEIARLINPEVEDRIKHLPAV
CCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCHH
ACLGDHAESPEAEQYLEIAEEAGFDRKWLRKIADSVDFQAFQLRHTPGRHLMNDVLGTTG
HEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC
DEHRHRRLVENLYKQHKIACERQLEAALKGVKEYETDGVKVVTLDVEKHARKFEYPGPGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCCCCC
TCGLVHDLKVEEEGDDAKVVTIAYGPDFAVIRATENLGINLNDIVSELEEEMPEAAVEGG
CCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
GHETAGSISFVEAHRNKVLKALVEKILRDATS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]