| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is kch [C]
Identifier: 20093566
GI number: 20093566
Start: 118826
End: 120259
Strand: Direct
Name: kch [C]
Synonym: MK0126
Alternate gene names: 20093566
Gene position: 118826-120259 (Clockwise)
Preceding gene: 20093565
Following gene: 20093570
Centisome position: 7.01
GC content: 58.16
Gene sequence:
>1434_bases TTGGGTGGTGGGTCAGTAGGTCACGTGGTAGCGGACGCACTGAGGGATCGTGGTGAAGAGGTGGTAATCGTCGACTGCAA CGAGGACCGTGCGGAGGTCCTGAGGGAGCAAGGCTTCGACGTGATTATCGGGGACATTACGGAGAAGGAAGTGTTACTTA AGGCGGGTATAGAAAGGGCCGTCATGGTGTACGTCCTCACCCCCGACGACGACGCGAACGCGGAAGCTATCAGACTGATT CGCGAGATCAACGAGGACACGTACGTCATCGCGCGGGTCACGGACGAGGAACGCGTTGAGGAGTTCAAGGAGCTCGGAGC GGACGAGGTTCTCTCCCCGAATCAGCTGCTGGTCGAGAAGTTGCTTCACAACATCGACAACGTGAGGAACCGCCGAAAAG TGCACGAGCTGTTAACGAAGCTCGAAGACGTGGAGACCCTGGCTATAATCCCGCACAACAACCCGGATCCCGACTCTATC GCCAGCGCTGTAGCCCTCCAGGAGATAGCCAGTATCGTCGACGTTCAATCCGACGTGGTGTATGGAGGCGAGATCGGCCA TCAGGAGAACAAAGCCCTCGTGAACCTCCTCGATATCGAGATGAAGCGGATATCACGTGTCGACCTCGATGAGTACGATG CCATCGCCGTAGTGGACACCCCGGTCCTACCGCGGGAGCTGGCGGAGTACGACGGTATCGAGGATAGGATCCTGGTGGCG GTCGACCATCACGATTCGTCGGACGGCATGATGGACATGAACGGCACCTCTAAGAGCGCTCTAGAGCTCGCGGACTTCGT GGATCATAGACCTGAGGTCGGTGCGGCTTCTACGATACTCACCCAATACCTCAAGATCCTCGATAGGAACGTCGACCGAA GGATAGCGACGGCGCTACTGTACGGTATCAGAACCGACACGCTGAACTTCACGAGGAACGTGTCACCGGAGGACCTCAAG GCGGCCGCGTATCTCTACCCGCGGGCCGATCACGAGGCGCTGGCTAAGATCGAGTCTCCGGACATCTCTCCCGAGACCCT CGACGTGCTCGGAGAGGCCATCCGCAACAGGACGGTTATCCGGAGCTACTTGTTCTCGAACGTGGGGTTCGTCAAGAACG AGGACGCCTTACCTCAAGCCGCCGACTACCTGCTCAACCTCGAAGGCGTTCACACGGTCATAGTGTTCGGTGTGGTCAAC GGCAAGGTGAAGATCTCCGCGCGAACGGACGATATCCGCCTGAACATAGGCGAGATAATGAAAGAAGCGTTCGGTGACGT GGGTTCCGCGGGAGGTCACTCGAAGGCCGCCGCGGCCGAGATCCCGTTAGGTATCTTCCAGGACGTCGAGAGCGACATGG TGCTCGACCTCGTCGAGCAGGCGGTACGTAAGCGGATCTTCAAGGTGATAGGTATCGAAGAGGAGGAGGACTGA
Upstream 100 bases:
>100_bases GCATAAACAGGTTTTAAGGAGTTGCCGTACCTCGTGCACGCCCAGTGTACAGCCTCCCGCGGGTTAACAGGGGGAAGCTG CGATCACCCTTCATGCCGTG
Downstream 100 bases:
>100_bases ACTCACTCCACGGTTACGCTCTTGGCCAGGTTCCGTGGATAGTCCGGATCGATGCCTCTGGCCACGCTCATGTAGTACGC CAGCAACTGAAGCGGTACCG
Product: Kef-type K+ transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MGGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERAVMVYVLTPDDDANAEAIRLI REINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEKLLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSI ASAVALQEIASIVDVQSDVVYGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVA VDHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALLYGIRTDTLNFTRNVSPEDLK AAAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVIRSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVN GKVKISARTDDIRLNIGEIMKEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED
Sequences:
>Translated_477_residues MGGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERAVMVYVLTPDDDANAEAIRLI REINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEKLLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSI ASAVALQEIASIVDVQSDVVYGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVA VDHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALLYGIRTDTLNFTRNVSPEDLK AAAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVIRSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVN GKVKISARTDDIRLNIGEIMKEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED >Mature_476_residues GGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERAVMVYVLTPDDDANAEAIRLIR EINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEKLLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSIA SAVALQEIASIVDVQSDVVYGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVAV DHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALLYGIRTDTLNFTRNVSPEDLKA AAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVIRSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVNG KVKISARTDDIRLNIGEIMKEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED
Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR003148 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 52658; Mature: 52527
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERA CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCHHHHHHHHCCCEE VMVYVLTPDDDANAEAIRLIREINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEK EEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHH LLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSIASAVALQEIASIVDVQSDVV HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEE YGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVA ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE VDHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALL EECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH YGIRTDTLNFTRNVSPEDLKAAAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVI HHHHHCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVNGKVKISARTDDIRLNIGEIM HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCEEECHHHHH KEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED HHHHCCCCCCCCCCCCHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERA CCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCHHHHHHHHCCCEE VMVYVLTPDDDANAEAIRLIREINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEK EEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHH LLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSIASAVALQEIASIVDVQSDVV HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEE YGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVA ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE VDHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALL EECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH YGIRTDTLNFTRNVSPEDLKAAAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVI HHHHHCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVNGKVKISARTDDIRLNIGEIM HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCEEECHHHHH KEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED HHHHCCCCCCCCCCCCHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]