Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is kch [C]

Identifier: 20093566

GI number: 20093566

Start: 118826

End: 120259

Strand: Direct

Name: kch [C]

Synonym: MK0126

Alternate gene names: 20093566

Gene position: 118826-120259 (Clockwise)

Preceding gene: 20093565

Following gene: 20093570

Centisome position: 7.01

GC content: 58.16

Gene sequence:

>1434_bases
TTGGGTGGTGGGTCAGTAGGTCACGTGGTAGCGGACGCACTGAGGGATCGTGGTGAAGAGGTGGTAATCGTCGACTGCAA
CGAGGACCGTGCGGAGGTCCTGAGGGAGCAAGGCTTCGACGTGATTATCGGGGACATTACGGAGAAGGAAGTGTTACTTA
AGGCGGGTATAGAAAGGGCCGTCATGGTGTACGTCCTCACCCCCGACGACGACGCGAACGCGGAAGCTATCAGACTGATT
CGCGAGATCAACGAGGACACGTACGTCATCGCGCGGGTCACGGACGAGGAACGCGTTGAGGAGTTCAAGGAGCTCGGAGC
GGACGAGGTTCTCTCCCCGAATCAGCTGCTGGTCGAGAAGTTGCTTCACAACATCGACAACGTGAGGAACCGCCGAAAAG
TGCACGAGCTGTTAACGAAGCTCGAAGACGTGGAGACCCTGGCTATAATCCCGCACAACAACCCGGATCCCGACTCTATC
GCCAGCGCTGTAGCCCTCCAGGAGATAGCCAGTATCGTCGACGTTCAATCCGACGTGGTGTATGGAGGCGAGATCGGCCA
TCAGGAGAACAAAGCCCTCGTGAACCTCCTCGATATCGAGATGAAGCGGATATCACGTGTCGACCTCGATGAGTACGATG
CCATCGCCGTAGTGGACACCCCGGTCCTACCGCGGGAGCTGGCGGAGTACGACGGTATCGAGGATAGGATCCTGGTGGCG
GTCGACCATCACGATTCGTCGGACGGCATGATGGACATGAACGGCACCTCTAAGAGCGCTCTAGAGCTCGCGGACTTCGT
GGATCATAGACCTGAGGTCGGTGCGGCTTCTACGATACTCACCCAATACCTCAAGATCCTCGATAGGAACGTCGACCGAA
GGATAGCGACGGCGCTACTGTACGGTATCAGAACCGACACGCTGAACTTCACGAGGAACGTGTCACCGGAGGACCTCAAG
GCGGCCGCGTATCTCTACCCGCGGGCCGATCACGAGGCGCTGGCTAAGATCGAGTCTCCGGACATCTCTCCCGAGACCCT
CGACGTGCTCGGAGAGGCCATCCGCAACAGGACGGTTATCCGGAGCTACTTGTTCTCGAACGTGGGGTTCGTCAAGAACG
AGGACGCCTTACCTCAAGCCGCCGACTACCTGCTCAACCTCGAAGGCGTTCACACGGTCATAGTGTTCGGTGTGGTCAAC
GGCAAGGTGAAGATCTCCGCGCGAACGGACGATATCCGCCTGAACATAGGCGAGATAATGAAAGAAGCGTTCGGTGACGT
GGGTTCCGCGGGAGGTCACTCGAAGGCCGCCGCGGCCGAGATCCCGTTAGGTATCTTCCAGGACGTCGAGAGCGACATGG
TGCTCGACCTCGTCGAGCAGGCGGTACGTAAGCGGATCTTCAAGGTGATAGGTATCGAAGAGGAGGAGGACTGA

Upstream 100 bases:

>100_bases
GCATAAACAGGTTTTAAGGAGTTGCCGTACCTCGTGCACGCCCAGTGTACAGCCTCCCGCGGGTTAACAGGGGGAAGCTG
CGATCACCCTTCATGCCGTG

Downstream 100 bases:

>100_bases
ACTCACTCCACGGTTACGCTCTTGGCCAGGTTCCGTGGATAGTCCGGATCGATGCCTCTGGCCACGCTCATGTAGTACGC
CAGCAACTGAAGCGGTACCG

Product: Kef-type K+ transporter

Products: K (I) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MGGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERAVMVYVLTPDDDANAEAIRLI
REINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEKLLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSI
ASAVALQEIASIVDVQSDVVYGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVA
VDHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALLYGIRTDTLNFTRNVSPEDLK
AAAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVIRSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVN
GKVKISARTDDIRLNIGEIMKEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED

Sequences:

>Translated_477_residues
MGGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERAVMVYVLTPDDDANAEAIRLI
REINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEKLLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSI
ASAVALQEIASIVDVQSDVVYGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVA
VDHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALLYGIRTDTLNFTRNVSPEDLK
AAAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVIRSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVN
GKVKISARTDDIRLNIGEIMKEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED
>Mature_476_residues
GGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERAVMVYVLTPDDDANAEAIRLIR
EINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEKLLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSIA
SAVALQEIASIVDVQSDVVYGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVAV
DHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALLYGIRTDTLNFTRNVSPEDLKA
AAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVIRSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVNG
KVKISARTDDIRLNIGEIMKEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED

Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR003148 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 52658; Mature: 52527

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERA
CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCHHHHHHHHCCCEE
VMVYVLTPDDDANAEAIRLIREINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEK
EEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHH
LLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSIASAVALQEIASIVDVQSDVV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEE
YGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVA
ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE
VDHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALL
EECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
YGIRTDTLNFTRNVSPEDLKAAAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVI
HHHHHCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
RSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVNGKVKISARTDDIRLNIGEIM
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCEEECHHHHH
KEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED
HHHHCCCCCCCCCCCCHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GGGSVGHVVADALRDRGEEVVIVDCNEDRAEVLREQGFDVIIGDITEKEVLLKAGIERA
CCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCHHHHHHHHCCCEE
VMVYVLTPDDDANAEAIRLIREINEDTYVIARVTDEERVEEFKELGADEVLSPNQLLVEK
EEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHH
LLHNIDNVRNRRKVHELLTKLEDVETLAIIPHNNPDPDSIASAVALQEIASIVDVQSDVV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEE
YGGEIGHQENKALVNLLDIEMKRISRVDLDEYDAIAVVDTPVLPRELAEYDGIEDRILVA
ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE
VDHHDSSDGMMDMNGTSKSALELADFVDHRPEVGAASTILTQYLKILDRNVDRRIATALL
EECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
YGIRTDTLNFTRNVSPEDLKAAAYLYPRADHEALAKIESPDISPETLDVLGEAIRNRTVI
HHHHHCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
RSYLFSNVGFVKNEDALPQAADYLLNLEGVHTVIVFGVVNGKVKISARTDDIRLNIGEIM
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCEEECHHHHH
KEAFGDVGSAGGHSKAAAAEIPLGIFQDVESDMVLDLVEQAVRKRIFKVIGIEEEED
HHHHCCCCCCCCCCCCHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]