Click here to switch to the map view.

The map label for this gene is UbiC

Identifier: 20093559

GI number: 20093559

Start: 113841

End: 114335

Strand: Reverse

Name: UbiC

Synonym: MK0119

Alternate gene names: NA

Gene position: 114335-113841 (Counterclockwise)

Preceding gene: 20093560

Following gene: 20093558

Centisome position: 6.75

GC content: 58.99

Gene sequence:

>495_bases
ATGGAGGTCCCGCTGCTGGAGGTGCTTCTCTACACGGACGGGTCGGTGACGAGAATCCTCGAGCGGTTCTTCGAGGAAGT
AACGATCGATCCCCTCGAAACCCGGAAGCTGAAAGTTGAGGGTCGAGAGGCGAGACTCCTCGGTGTCCCCGACGGAGACA
CCGTATACGTCCGACGAGTCGTCATCAAGGTCGACGGTCGACCCGCCATCCTAGCCACTTCACTCGCCCGTCCCGACAAC
CTTCCAGGGCGCTTGCGTAGACTGGTGCTTCAATCGAGAAAACCGCTCGGAAAGATGATCGAAGAGTTGAGGCTGGAGAC
GCGGCGTGAGATACTCCGCGTTGAGGAGGCGCGACCGTCGCCTGAAGACGAGGAGATATTGGATGTGAGTGTACCGAAGA
TACCCTGGCGCGAGTATTTGGTCTACCATCGAAGGACGCCGATGCTGCTGATTCGTGAGAGGTTCAACCCCGAGGTCCTC
GGTCGGGAGGGTTAG

Upstream 100 bases:

>100_bases
AAGGAGATCAAGGAGCGGCTCGAGCGTGGGGAGAAGGTCAGCTGGGAGGAACTCCAGCTACTGCAGGAGTACGGCGAAAT
GTGAGATGGAGGTTCATCGG

Downstream 100 bases:

>100_bases
CGTGGTCCAAATGATGCTCGATGTGACGCGCTTACCCGGTGATCGACTGCTGATATCCTCCGATATACACGTCGGTGACG
AGTACCAGGGACACGATCGG

Product: chorismate--pyruvate lyase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MEVPLLEVLLYTDGSVTRILERFFEEVTIDPLETRKLKVEGREARLLGVPDGDTVYVRRVVIKVDGRPAILATSLARPDN
LPGRLRRLVLQSRKPLGKMIEELRLETRREILRVEEARPSPEDEEILDVSVPKIPWREYLVYHRRTPMLLIRERFNPEVL
GREG

Sequences:

>Translated_164_residues
MEVPLLEVLLYTDGSVTRILERFFEEVTIDPLETRKLKVEGREARLLGVPDGDTVYVRRVVIKVDGRPAILATSLARPDN
LPGRLRRLVLQSRKPLGKMIEELRLETRREILRVEEARPSPEDEEILDVSVPKIPWREYLVYHRRTPMLLIRERFNPEVL
GREG
>Mature_164_residues
MEVPLLEVLLYTDGSVTRILERFFEEVTIDPLETRKLKVEGREARLLGVPDGDTVYVRRVVIKVDGRPAILATSLARPDN
LPGRLRRLVLQSRKPLGKMIEELRLETRREILRVEEARPSPEDEEILDVSVPKIPWREYLVYHRRTPMLLIRERFNPEVL
GREG

Specific function: Unknown

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19131; Mature: 19131

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVPLLEVLLYTDGSVTRILERFFEEVTIDPLETRKLKVEGREARLLGVPDGDTVYVRRV
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEE
VIKVDGRPAILATSLARPDNLPGRLRRLVLQSRKPLGKMIEELRLETRREILRVEEARPS
EEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PEDEEILDVSVPKIPWREYLVYHRRTPMLLIRERFNPEVLGREG
CCCCCEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MEVPLLEVLLYTDGSVTRILERFFEEVTIDPLETRKLKVEGREARLLGVPDGDTVYVRRV
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEE
VIKVDGRPAILATSLARPDNLPGRLRRLVLQSRKPLGKMIEELRLETRREILRVEEARPS
EEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PEDEEILDVSVPKIPWREYLVYHRRTPMLLIRERFNPEVLGREG
CCCCCEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA