| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20093553
Identifier: 20093553
GI number: 20093553
Start: 108066
End: 109103
Strand: Reverse
Name: 20093553
Synonym: MK0113
Alternate gene names: NA
Gene position: 109103-108066 (Counterclockwise)
Preceding gene: 20093554
Following gene: 20093551
Centisome position: 6.44
GC content: 59.06
Gene sequence:
>1038_bases ATGGGTTGCGAGTGTATCGGGGGTAACGTCGTGAAAGCATTGGGGTTGGATGTGGGCGGAGCACACACCGACGCTGCTCT AGTTCGTTATGATGAGGATGGTAAGGTGATGGTATTAGGGACTGATAGGGTATATCTTCCGATGTGGAAGAAGAAAAAAC GGCTAAAGAAAACTATCAAGAGGATTGTTCACAAGTTCAAGCCGGATGTCGTCGGTTTAACCATGACGGGCGAGTTAGCT GATGCCTTCAACACGAGACGGGAAGGAGTCGAGTACATCGTCCGCACCGTCACCTCGGCGTGTCACGCCCCGGTCTACGT GGTGACCTCCGATGGTTCGACGGTGCCCCCGGAAGAGGCCCTCAGACGTTGGCGTGAGGTCGCGTCGGCCAACTGGAGGG CGACGGCCGAGGTCTTAGCTCACGTCCGACCGGGTTCCTACCTCCTGGTGGATCTGGGGTCTACCACGCTGGATCTGATT CCCATCATCCGCGGTGAGGTCGCGGCCGAGGGACGTACCGATTTGGAAAGGATGAAGAACGGAGAATTGGCGTACTTGGG GGCGCTGAGAACGCCAATATCTTTTCTGCTCCGAGAAGTTGAGATCGACGGTGAGCCGGTACCGGTCTCGTACGAATACT TCTCAATCGTGGCGGACGCGTTGCTATTGCTCGGTGAAATCGACCCGGAGGATTACACTCCGGAGACACCGGACGGTCGC GGAAAATCCCCAGAGGAGTGCGCCCGCAGGCTCGCCCGAACGGTGTGCTCGGATCCGGAGGAACTCGGTTGGGAGGGTGT GATGGATCTAGCGAAGACCGCGGTTCGGGCGCTGCTCGGACAGCTACTGAAGCACATCGAGCTCAAGCTTCAAGAGCACG GGCTGGACACAGTGGTGGCAGCCGGCGCGGGCGATTTCCTGATCGAGATGGCCTGCAAGAGGATCGGCGTCGAGGTGGAA CCGTTCGACGAGATCTTCGGGAAAGGTTCCGAGGTCGCGCCGGCGGTCGGTGCCGCGTTCCTCGCGATCAGGCGCTAG
Upstream 100 bases:
>100_bases CCGACCGGGAAGGTGCTGCGGTACCGTCGTGAGTACGTATACGTGAAGCGTGGGGCTGAGGCATTGGTGCCCGAGAAGTT CGAGGTCGTTGAGGACTTCC
Downstream 100 bases:
>100_bases GCGGTAGTTATCCCCGCCACTCGGGAAGCTCCTCACGGGCTAGTTTCAGGTAGCGTCTGGCGTTCTCGCGGATCTCGTCG ACGCGTTCCTCGTCGGTCGT
Product: sugar kinase of the RNAseH/HSP70 fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MGCECIGGNVVKALGLDVGGAHTDAALVRYDEDGKVMVLGTDRVYLPMWKKKKRLKKTIKRIVHKFKPDVVGLTMTGELA DAFNTRREGVEYIVRTVTSACHAPVYVVTSDGSTVPPEEALRRWREVASANWRATAEVLAHVRPGSYLLVDLGSTTLDLI PIIRGEVAAEGRTDLERMKNGELAYLGALRTPISFLLREVEIDGEPVPVSYEYFSIVADALLLLGEIDPEDYTPETPDGR GKSPEECARRLARTVCSDPEELGWEGVMDLAKTAVRALLGQLLKHIELKLQEHGLDTVVAAGAGDFLIEMACKRIGVEVE PFDEIFGKGSEVAPAVGAAFLAIRR
Sequences:
>Translated_345_residues MGCECIGGNVVKALGLDVGGAHTDAALVRYDEDGKVMVLGTDRVYLPMWKKKKRLKKTIKRIVHKFKPDVVGLTMTGELA DAFNTRREGVEYIVRTVTSACHAPVYVVTSDGSTVPPEEALRRWREVASANWRATAEVLAHVRPGSYLLVDLGSTTLDLI PIIRGEVAAEGRTDLERMKNGELAYLGALRTPISFLLREVEIDGEPVPVSYEYFSIVADALLLLGEIDPEDYTPETPDGR GKSPEECARRLARTVCSDPEELGWEGVMDLAKTAVRALLGQLLKHIELKLQEHGLDTVVAAGAGDFLIEMACKRIGVEVE PFDEIFGKGSEVAPAVGAAFLAIRR >Mature_344_residues GCECIGGNVVKALGLDVGGAHTDAALVRYDEDGKVMVLGTDRVYLPMWKKKKRLKKTIKRIVHKFKPDVVGLTMTGELAD AFNTRREGVEYIVRTVTSACHAPVYVVTSDGSTVPPEEALRRWREVASANWRATAEVLAHVRPGSYLLVDLGSTTLDLIP IIRGEVAAEGRTDLERMKNGELAYLGALRTPISFLLREVEIDGEPVPVSYEYFSIVADALLLLGEIDPEDYTPETPDGRG KSPEECARRLARTVCSDPEELGWEGVMDLAKTAVRALLGQLLKHIELKLQEHGLDTVVAAGAGDFLIEMACKRIGVEVEP FDEIFGKGSEVAPAVGAAFLAIRR
Specific function: Unknown
COG id: COG1548
COG function: function code KG; Predicted transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002756 - InterPro: IPR002821 [H]
Pfam domain/function: PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 37670; Mature: 37539
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCECIGGNVVKALGLDVGGAHTDAALVRYDEDGKVMVLGTDRVYLPMWKKKKRLKKTIK CCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCEEEECHHHHHHHHHHHHH RIVHKFKPDVVGLTMTGELADAFNTRREGVEYIVRTVTSACHAPVYVVTSDGSTVPPEEA HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH LRRWREVASANWRATAEVLAHVRPGSYLLVDLGSTTLDLIPIIRGEVAAEGRTDLERMKN HHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHCC GELAYLGALRTPISFLLREVEIDGEPVPVSYEYFSIVADALLLLGEIDPEDYTPETPDGR CCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GKSPEECARRLARTVCSDPEELGWEGVMDLAKTAVRALLGQLLKHIELKLQEHGLDTVVA CCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE AGAGDFLIEMACKRIGVEVEPFDEIFGKGSEVAPAVGAAFLAIRR CCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure GCECIGGNVVKALGLDVGGAHTDAALVRYDEDGKVMVLGTDRVYLPMWKKKKRLKKTIK CCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCEEEECHHHHHHHHHHHHH RIVHKFKPDVVGLTMTGELADAFNTRREGVEYIVRTVTSACHAPVYVVTSDGSTVPPEEA HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH LRRWREVASANWRATAEVLAHVRPGSYLLVDLGSTTLDLIPIIRGEVAAEGRTDLERMKN HHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHCC GELAYLGALRTPISFLLREVEIDGEPVPVSYEYFSIVADALLLLGEIDPEDYTPETPDGR CCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GKSPEECARRLARTVCSDPEELGWEGVMDLAKTAVRALLGQLLKHIELKLQEHGLDTVVA CCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE AGAGDFLIEMACKRIGVEVEPFDEIFGKGSEVAPAVGAAFLAIRR CCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]