| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093550
Identifier: 20093550
GI number: 20093550
Start: 104669
End: 105400
Strand: Direct
Name: 20093550
Synonym: MK0110
Alternate gene names: NA
Gene position: 104669-105400 (Clockwise)
Preceding gene: 20093549
Following gene: 20093552
Centisome position: 6.18
GC content: 58.06
Gene sequence:
>732_bases ATGATCAGACGGCTGGTCGAGCGGTATCTCAGGCACGTCACCAAAAAGCGGCTGACACGCAGACCCACCACGGCGCTGAT CTACACGTGCCTCCTCGGGATGAAAGCCATAGCTCGAGCGTTTTCCGAGGAAACCATCTCGTCTATTTCCCCCGAACCCC TCTGGACCGTGGAATCCGTATCCCTGGTACGGATTGGGACCTATCCGGGAGACGTCCTCTGTTCCGAGCTGGTCTCATTC CTCACTCGCGAGTTCGAAGAGGAAGAAAGAGTCGAAGACGTGCTACCGGAGGTGGAAGTCGAAGCGGAGTTTCTGGCCCG GGTGAGACGTTTCAACGACCTCCTGTACGAAGACATCGAGCTCCCGTTCGAGATCGAAGGTACCGGCGAAGAGGAACCCG ATCTCGACCTGCGTCTGATCGAGGTCCTCCTAGCGCTCGACGAAATCCCGCAATCCGAGCAGGGACGGTACGCAAAGCCG TTCATACTCACCTGTTTCGAAACGCTCTCAGACTACCTCGATGTGCTGGGACTACGATGGTCGGACGTCGACACCGTGCG CCGTAAGGTAAGGATCAAAGGACGCGTCCATCGTATTTCACGGGCACTCGCCTACGAGCTCCGAAGGATTCCACGCGAAG GTGAGGAGGTGTTTCCGATAAGCTCCGTGGACGTGATGCGATGGGAACGGGCCGTATCGAAGGAGGTGGGGCGGAGGCTC AGGTTCCTGTGA
Upstream 100 bases:
>100_bases AAGGGGCGTCTGAGGTGAACATATCGTTCGTAGTAGCGGAGGAGGACGAGGCGGCGGCGGTTAACGCGGTTCACAGCGAA TTCGAACTCGGTGAGGAGGC
Downstream 100 bases:
>100_bases GTCGTCGAGCGCTCTCAAGGATTTTCCGGGCAAGTTGTTCTCCTATCCCTCTCACCCTCGTCAGCTCCGGGACAGTGGCT TCGGCCAGATCCCGGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIRRLVERYLRHVTKKRLTRRPTTALIYTCLLGMKAIARAFSEETISSISPEPLWTVESVSLVRIGTYPGDVLCSELVSF LTREFEEEERVEDVLPEVEVEAEFLARVRRFNDLLYEDIELPFEIEGTGEEEPDLDLRLIEVLLALDEIPQSEQGRYAKP FILTCFETLSDYLDVLGLRWSDVDTVRRKVRIKGRVHRISRALAYELRRIPREGEEVFPISSVDVMRWERAVSKEVGRRL RFL
Sequences:
>Translated_243_residues MIRRLVERYLRHVTKKRLTRRPTTALIYTCLLGMKAIARAFSEETISSISPEPLWTVESVSLVRIGTYPGDVLCSELVSF LTREFEEEERVEDVLPEVEVEAEFLARVRRFNDLLYEDIELPFEIEGTGEEEPDLDLRLIEVLLALDEIPQSEQGRYAKP FILTCFETLSDYLDVLGLRWSDVDTVRRKVRIKGRVHRISRALAYELRRIPREGEEVFPISSVDVMRWERAVSKEVGRRL RFL >Mature_243_residues MIRRLVERYLRHVTKKRLTRRPTTALIYTCLLGMKAIARAFSEETISSISPEPLWTVESVSLVRIGTYPGDVLCSELVSF LTREFEEEERVEDVLPEVEVEAEFLARVRRFNDLLYEDIELPFEIEGTGEEEPDLDLRLIEVLLALDEIPQSEQGRYAKP FILTCFETLSDYLDVLGLRWSDVDTVRRKVRIKGRVHRISRALAYELRRIPREGEEVFPISSVDVMRWERAVSKEVGRRL RFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28446; Mature: 28446
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRLVERYLRHVTKKRLTRRPTTALIYTCLLGMKAIARAFSEETISSISPEPLWTVESV CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC SLVRIGTYPGDVLCSELVSFLTREFEEEERVEDVLPEVEVEAEFLARVRRFNDLLYEDIE EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC LPFEIEGTGEEEPDLDLRLIEVLLALDEIPQSEQGRYAKPFILTCFETLSDYLDVLGLRW CCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC SDVDTVRRKVRIKGRVHRISRALAYELRRIPREGEEVFPISSVDVMRWERAVSKEVGRRL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RFL CCC >Mature Secondary Structure MIRRLVERYLRHVTKKRLTRRPTTALIYTCLLGMKAIARAFSEETISSISPEPLWTVESV CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC SLVRIGTYPGDVLCSELVSFLTREFEEEERVEDVLPEVEVEAEFLARVRRFNDLLYEDIE EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC LPFEIEGTGEEEPDLDLRLIEVLLALDEIPQSEQGRYAKPFILTCFETLSDYLDVLGLRW CCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC SDVDTVRRKVRIKGRVHRISRALAYELRRIPREGEEVFPISSVDVMRWERAVSKEVGRRL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RFL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA