| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093548
Identifier: 20093548
GI number: 20093548
Start: 102514
End: 103230
Strand: Reverse
Name: 20093548
Synonym: MK0108
Alternate gene names: NA
Gene position: 103230-102514 (Counterclockwise)
Preceding gene: 20093551
Following gene: 20093547
Centisome position: 6.09
GC content: 59.83
Gene sequence:
>717_bases GTGGCCAAGGCCGAGAGGTCGGACGCGGGTAAGGATAAGGTGTGGATCCCGGACGAGGAGGCGAAGCGTATAGGTGCCGA CGTCAGCCTCCAGGTCCTCGACGCGTTAGCCAAAAGGGATTACCCCGTGTACGACCTGAAGAAGCACGCCGAACTCGACG TCCGTAGTGTGGCCAGGGAAGTGGTCAGGGAAATAGGTGGAATGGCGGGTCTCGAGTTCTCACTCAAGGGGGTCGACACT GTACTGGACAAGTTCCTCAGCAAGATCCCCGTCGTGAAAACCGTTGTCGCCGAGGAGGAGCTCGAGCCAGTGGCGGAGGA AGACCGTTACGTGTGCTTCATCGCCGTCGATCCCCGCAACTACCGGGAGTTACGGGAGAAAGCCGGAGCGATCGCCGTCA CCGCCCGGGAAGAGCTCGATCTCGACCATACACCACTGGTCCTCGTTCGGAACGACTTGTGTGTGGGGCCCGAAGAGTTC GGAGTGCTCGCGCTTCACTCCTCGGAGGTCGCGAAGGAACGACCTCCCTTCAAGGTGGAGGTTTTAGTGGGCGAAGACCT GAAGCCGACGATGATCCGTCTCGCCCGCTTCATAGCCAGCACCGTAGCCACCCGCACCGTCTATCTGAAGTTCCCGTACG TGGTGGTGAAGGAAAGCCTGTTGGTCGAGAAAGGAGACTACAAGGTACGCGTCAAAACGCCCGAAGAGGTGGAGTGA
Upstream 100 bases:
>100_bases ACTTTCCTAATGGACTCTCCGGTACCTACCGAGGTACCGCCGAACTTCATAACGACCCTCAAGGTCCTCCTCCCTACTCG CGGGTTCCGGGGTGACGAAC
Downstream 100 bases:
>100_bases AATGATTCACCCCTCACGCCTATTCGTGAAACTCTCGGCCTCCCCGCGGGTCGATGGGGAGATCGTCGCCTGCGGTACCA AGTACGACCCGATCACCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MAKAERSDAGKDKVWIPDEEAKRIGADVSLQVLDALAKRDYPVYDLKKHAELDVRSVAREVVREIGGMAGLEFSLKGVDT VLDKFLSKIPVVKTVVAEEELEPVAEEDRYVCFIAVDPRNYRELREKAGAIAVTAREELDLDHTPLVLVRNDLCVGPEEF GVLALHSSEVAKERPPFKVEVLVGEDLKPTMIRLARFIASTVATRTVYLKFPYVVVKESLLVEKGDYKVRVKTPEEVE
Sequences:
>Translated_238_residues MAKAERSDAGKDKVWIPDEEAKRIGADVSLQVLDALAKRDYPVYDLKKHAELDVRSVAREVVREIGGMAGLEFSLKGVDT VLDKFLSKIPVVKTVVAEEELEPVAEEDRYVCFIAVDPRNYRELREKAGAIAVTAREELDLDHTPLVLVRNDLCVGPEEF GVLALHSSEVAKERPPFKVEVLVGEDLKPTMIRLARFIASTVATRTVYLKFPYVVVKESLLVEKGDYKVRVKTPEEVE >Mature_237_residues AKAERSDAGKDKVWIPDEEAKRIGADVSLQVLDALAKRDYPVYDLKKHAELDVRSVAREVVREIGGMAGLEFSLKGVDTV LDKFLSKIPVVKTVVAEEELEPVAEEDRYVCFIAVDPRNYRELREKAGAIAVTAREELDLDHTPLVLVRNDLCVGPEEFG VLALHSSEVAKERPPFKVEVLVGEDLKPTMIRLARFIASTVATRTVYLKFPYVVVKESLLVEKGDYKVRVKTPEEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26676; Mature: 26545
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAERSDAGKDKVWIPDEEAKRIGADVSLQVLDALAKRDYPVYDLKKHAELDVRSVARE CCCCCCCCCCCCCEECCCHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHH VVREIGGMAGLEFSLKGVDTVLDKFLSKIPVVKTVVAEEELEPVAEEDRYVCFIAVDPRN HHHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCC YRELREKAGAIAVTAREELDLDHTPLVLVRNDLCVGPEEFGVLALHSSEVAKERPPFKVE HHHHHHHCCEEEEEEHHHCCCCCCCEEEEECCCCCCHHHHCEEEEECCHHHHCCCCEEEE VLVGEDLKPTMIRLARFIASTVATRTVYLKFPYVVVKESLLVEKGDYKVRVKTPEEVE EEECCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHEECCCEEEEECCCCCCC >Mature Secondary Structure AKAERSDAGKDKVWIPDEEAKRIGADVSLQVLDALAKRDYPVYDLKKHAELDVRSVARE CCCCCCCCCCCCEECCCHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHH VVREIGGMAGLEFSLKGVDTVLDKFLSKIPVVKTVVAEEELEPVAEEDRYVCFIAVDPRN HHHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCC YRELREKAGAIAVTAREELDLDHTPLVLVRNDLCVGPEEFGVLALHSSEVAKERPPFKVE HHHHHHHCCEEEEEEHHHCCCCCCCEEEEECCCCCCHHHHCEEEEECCHHHHCCCCEEEE VLVGEDLKPTMIRLARFIASTVATRTVYLKFPYVVVKESLLVEKGDYKVRVKTPEEVE EEECCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHEECCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA