Click here to switch to the map view.

The map label for this gene is 20093518

Identifier: 20093518

GI number: 20093518

Start: 73121

End: 74119

Strand: Direct

Name: 20093518

Synonym: MK0078

Alternate gene names: NA

Gene position: 73121-74119 (Clockwise)

Preceding gene: 20093517

Following gene: 20093519

Centisome position: 4.31

GC content: 61.56

Gene sequence:

>999_bases
GTGACGAGAATGTACGTGGGGATCGATCACGGTACCTCGGGGATCAAAGTTGCAGCGTACGACGGTGAAGGAGACCCGGA
GTTTTTAGGCAAAGCACCGAGACGGAAGGTGGCCGAGCGTGGGTTGCTCCGATCCCTCCCCGACGAAGCCCGGAGGGCAG
TAGAGGAGGCCGAGTGCATCTGTCTGAACTATGGGATGGGCGACGCGCTCACGGAGTTCACGCCGCTAGAGGAAGCGGAG
GATCTCGGCGTAGGATACGGACTACGTGATACCAGCGGAGCGGGGCGGGAGTTCGGCGCCGGGAGACGTATGGTCGAGGA
GCTGTCAGAGCTCGGCGTTGAGGCCTATCTAGCACCGGGTATTCATCGGGACTTACCGCGGCTGGACGGGGCATTCCGAG
TGTTCTCACACGTAGCGAGCGGTGAGAAGCTGGGAACAGCGAGGCTCGCACTCGAGTTATCCTCCTCGAAGGATATCGTG
GTGTGTGACACAAGCTCGAACACAGTTTCCGTGGTAGTGAAGGACGGCGAAGTAATCGGCGGAATCGACGCGTGCCTCGG
CGCTCCGGGCGTATTGCAGGGACCGTTGGACTTGGAGGCCATTCGCAGGATCGACGCGGGTGAACTGTCGGCCAACGGGG
CGTTTTCAACCGGAGGGATCGTTAAGATCGTCAACTGCGCCGGGGAAGATCCCGAGAGCGCGGTAGAGGAATTCATCCAG
AGGTGTGGCAAGGAAGAGAAGGAGTGGCTGGCACGGCTGGTCGCTTGGGAGGTGGCGGGGTTAGGCGTCGTCTACGACTG
CGACGAGGCGTGGATCGGAGGTACGTTGTCGGGAGACGACGAATTCATGGGGGTGCTGGAGAGAGTCCTGAGCAAGGCTT
TTAACAAGGTCGCCGGGCTACCGCCCGAGTCGGCTTCGATGGGACTAGCCCTGATCGCCGCAGACATAGCCTCCGGAGCC
CGGTCGGTGTTGGGGGTGCGAATTTCTCGCCGCCCCTGA

Upstream 100 bases:

>100_bases
TTCAGCTGGGCTCGCTTAAAGTGGACCCGGAGACAGGGTCTCACGAGCCTATGAACGTACGAGTTTGACTCCAGTCCTGA
AGGGTTAAGCTTTCGGGGCT

Downstream 100 bases:

>100_bases
TTTCATACCTGGGGCCGCCAGGCACGTTCACAGAGGAGGCGGCTGAGCGGTTTTCTGAGGAAGAACTTGGGGGAAACGGA
AAGCTCCAGTCTGCCAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTRMYVGIDHGTSGIKVAAYDGEGDPEFLGKAPRRKVAERGLLRSLPDEARRAVEEAECICLNYGMGDALTEFTPLEEAE
DLGVGYGLRDTSGAGREFGAGRRMVEELSELGVEAYLAPGIHRDLPRLDGAFRVFSHVASGEKLGTARLALELSSSKDIV
VCDTSSNTVSVVVKDGEVIGGIDACLGAPGVLQGPLDLEAIRRIDAGELSANGAFSTGGIVKIVNCAGEDPESAVEEFIQ
RCGKEEKEWLARLVAWEVAGLGVVYDCDEAWIGGTLSGDDEFMGVLERVLSKAFNKVAGLPPESASMGLALIAADIASGA
RSVLGVRISRRP

Sequences:

>Translated_332_residues
MTRMYVGIDHGTSGIKVAAYDGEGDPEFLGKAPRRKVAERGLLRSLPDEARRAVEEAECICLNYGMGDALTEFTPLEEAE
DLGVGYGLRDTSGAGREFGAGRRMVEELSELGVEAYLAPGIHRDLPRLDGAFRVFSHVASGEKLGTARLALELSSSKDIV
VCDTSSNTVSVVVKDGEVIGGIDACLGAPGVLQGPLDLEAIRRIDAGELSANGAFSTGGIVKIVNCAGEDPESAVEEFIQ
RCGKEEKEWLARLVAWEVAGLGVVYDCDEAWIGGTLSGDDEFMGVLERVLSKAFNKVAGLPPESASMGLALIAADIASGA
RSVLGVRISRRP
>Mature_331_residues
TRMYVGIDHGTSGIKVAAYDGEGDPEFLGKAPRRKVAERGLLRSLPDEARRAVEEAECICLNYGMGDALTEFTPLEEAED
LGVGYGLRDTSGAGREFGAGRRMVEELSELGVEAYLAPGIHRDLPRLDGAFRVFSHVASGEKLGTARLALELSSSKDIVV
CDTSSNTVSVVVKDGEVIGGIDACLGAPGVLQGPLDLEAIRRIDAGELSANGAFSTGGIVKIVNCAGEDPESAVEEFIQR
CGKEEKEWLARLVAWEVAGLGVVYDCDEAWIGGTLSGDDEFMGVLERVLSKAFNKVAGLPPESASMGLALIAADIASGAR
SVLGVRISRRP

Specific function: Unknown

COG id: COG4020

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0285 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y078_METKA (Q8TZ61)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613365.1
- ProteinModelPortal:   Q8TZ61
- GeneID:   1477381
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0078
- NMPDR:   fig|190192.1.peg.78
- HOGENOM:   HBG539696
- OMA:   DHGTSGI
- ProtClustDB:   PRK00976
- BioCyc:   MKAN190192:MK0078-MONOMER
- HAMAP:   MF_01087
- InterPro:   IPR009927
- InterPro:   IPR016735
- PIRSF:   PIRSF018783
- TIGRFAMs:   TIGR03281

Pfam domain/function: PF07318 DUF1464

EC number: NA

Molecular weight: Translated: 35059; Mature: 34928

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRMYVGIDHGTSGIKVAAYDGEGDPEFLGKAPRRKVAERGLLRSLPDEARRAVEEAECI
CCEEEEEECCCCCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEE
CLNYGMGDALTEFTPLEEAEDLGVGYGLRDTSGAGREFGAGRRMVEELSELGVEAYLAPG
EEECCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEECCC
IHRDLPRLDGAFRVFSHVASGEKLGTARLALELSSSKDIVVCDTSSNTVSVVVKDGEVIG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCEEC
GIDACLGAPGVLQGPLDLEAIRRIDAGELSANGAFSTGGIVKIVNCAGEDPESAVEEFIQ
CHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
RCGKEEKEWLARLVAWEVAGLGVVYDCDEAWIGGTLSGDDEFMGVLERVLSKAFNKVAGL
HHCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PPESASMGLALIAADIASGARSVLGVRISRRP
CCCCHHCCHHHHHHHHHHHHHHHHEEEECCCC
>Mature Secondary Structure 
TRMYVGIDHGTSGIKVAAYDGEGDPEFLGKAPRRKVAERGLLRSLPDEARRAVEEAECI
CEEEEEECCCCCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEE
CLNYGMGDALTEFTPLEEAEDLGVGYGLRDTSGAGREFGAGRRMVEELSELGVEAYLAPG
EEECCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEECCC
IHRDLPRLDGAFRVFSHVASGEKLGTARLALELSSSKDIVVCDTSSNTVSVVVKDGEVIG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCEEC
GIDACLGAPGVLQGPLDLEAIRRIDAGELSANGAFSTGGIVKIVNCAGEDPESAVEEFIQ
CHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
RCGKEEKEWLARLVAWEVAGLGVVYDCDEAWIGGTLSGDDEFMGVLERVLSKAFNKVAGL
HHCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PPESASMGLALIAADIASGARSVLGVRISRRP
CCCCHHCCHHHHHHHHHHHHHHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014