| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093507
Identifier: 20093507
GI number: 20093507
Start: 61681
End: 62895
Strand: Reverse
Name: 20093507
Synonym: MK0067
Alternate gene names: NA
Gene position: 62895-61681 (Counterclockwise)
Preceding gene: 20093508
Following gene: 20093506
Centisome position: 3.71
GC content: 58.35
Gene sequence:
>1215_bases GTGTTCCACGGTGTGATCGCGGCCTTCACCACCTATCTAGGTGCCAGCGCGGCACTAATGCTCAGGTACCACTCCGTCGG TGTGTCGGAAGCCCTAACCTACGGGGCCGTTTACGGGATGGCCGCGGCCGCCATCGGAGTCGGCACAGGGGTAATGCTGA CACGCGTGTTAGGGGCCCGTAAAAAGCGCCGTGAGGTCATTCGCACCGTGTTGGAAGGGACAGCGCTTTCCGGAGTCGCC CTCCTCGTCGGCCTTCTCGACGTGACCGCCGGGGCTATCGCGGCGTCCTCCGTCGCTCTGGTGTATCCATCTTATCGCAT CTCACGTGATCTCGGCGTATCACCCTTCAAAATAGTCACCCTCCTCGCCGTGACATCTTCGGTGATCGTAGCCGCGCTGA CCTCGTGGATGATCGTTCCGGCCTTCGCCGATAACCCGATCTACGCGCTTGCGATAGCGTTCTTCGTGTTCATCGTGGGG TTGAAGACGGGGTTAGGAATAGGGTTCGCGGGCTTCCAGTTACGTCGTGGGGCGATGGTTATCGCAGCGCTTTCCGGGAT ACTAATACCGGCGATAATAGGCCTGAGTCACCTGGTTTCCAAGTTCATGAAAACGGCGCTCGCCATGCAGAGGTACGCTC TCCTCGGTCACGCCTTGCTGGGGTTGTTTCTCATCGGATTGGGAATATTCATAGCCCGTAAGTGGGCGGTAGAAGGTTCA GCGAAGGATCTCTCTAAGCTAGGAGCATTCGTCGTGGCCGTTCCGTGTCCGATCTGCCTGACCGGAGTGGCCCTATCGAT CGCCATGTACGCCGAGATAGGCGCCCTTAACGTCACCCAAGCCGCCTTGGTACTCTGGACTTGCTTCGTTTCGACGGCGT ACGCCACCTTGATCGTCGCCGATGCGGTTATCGAGGTCCTCAAAGTTCCCCCGGCCGTGGCCCTTAGTGGCCTCGAGAAC TTAGTAGGACTCCTTTTCGTGATCACGGGGATTATCGCGTGGGCCTATCCGTTATGGAAGCGAGCACCTAAACTCAAGCT GGCCCTTCCGAGCCCTTCGAAAATAGGCCCATGGGCGTTACTGTTCCTGGCTTTGATGGCGTTCGGGTACCTATGGGCGG TGCGCAAGGCTTCACGAGGAAACTACCCACCGGATAACCCGATCGACGATATCATCAGGGCGGTGATCGAATGGTTAGCA TCGCGACGGCGATAA
Upstream 100 bases:
>100_bases TCAAGTACTATGAGTTGTCAGAAAACTTACTTTACTTACCTCCGTTTAACATCCTATTCCCTCTGGTCGGCGCATTCGGC CCCTGACGGGGGAATGACGG
Downstream 100 bases:
>100_bases CTCAGGCTCTGTACGTGGTAATGGAGCTGTTGTTTTACCCGACGATAGTACTGTTGCTGCTGTTCTTGGCTTACTCTCTG ATGGAGCTGGCTATATTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MFHGVIAAFTTYLGASAALMLRYHSVGVSEALTYGAVYGMAAAAIGVGTGVMLTRVLGARKKRREVIRTVLEGTALSGVA LLVGLLDVTAGAIAASSVALVYPSYRISRDLGVSPFKIVTLLAVTSSVIVAALTSWMIVPAFADNPIYALAIAFFVFIVG LKTGLGIGFAGFQLRRGAMVIAALSGILIPAIIGLSHLVSKFMKTALAMQRYALLGHALLGLFLIGLGIFIARKWAVEGS AKDLSKLGAFVVAVPCPICLTGVALSIAMYAEIGALNVTQAALVLWTCFVSTAYATLIVADAVIEVLKVPPAVALSGLEN LVGLLFVITGIIAWAYPLWKRAPKLKLALPSPSKIGPWALLFLALMAFGYLWAVRKASRGNYPPDNPIDDIIRAVIEWLA SRRR
Sequences:
>Translated_404_residues MFHGVIAAFTTYLGASAALMLRYHSVGVSEALTYGAVYGMAAAAIGVGTGVMLTRVLGARKKRREVIRTVLEGTALSGVA LLVGLLDVTAGAIAASSVALVYPSYRISRDLGVSPFKIVTLLAVTSSVIVAALTSWMIVPAFADNPIYALAIAFFVFIVG LKTGLGIGFAGFQLRRGAMVIAALSGILIPAIIGLSHLVSKFMKTALAMQRYALLGHALLGLFLIGLGIFIARKWAVEGS AKDLSKLGAFVVAVPCPICLTGVALSIAMYAEIGALNVTQAALVLWTCFVSTAYATLIVADAVIEVLKVPPAVALSGLEN LVGLLFVITGIIAWAYPLWKRAPKLKLALPSPSKIGPWALLFLALMAFGYLWAVRKASRGNYPPDNPIDDIIRAVIEWLA SRRR >Mature_404_residues MFHGVIAAFTTYLGASAALMLRYHSVGVSEALTYGAVYGMAAAAIGVGTGVMLTRVLGARKKRREVIRTVLEGTALSGVA LLVGLLDVTAGAIAASSVALVYPSYRISRDLGVSPFKIVTLLAVTSSVIVAALTSWMIVPAFADNPIYALAIAFFVFIVG LKTGLGIGFAGFQLRRGAMVIAALSGILIPAIIGLSHLVSKFMKTALAMQRYALLGHALLGLFLIGLGIFIARKWAVEGS AKDLSKLGAFVVAVPCPICLTGVALSIAMYAEIGALNVTQAALVLWTCFVSTAYATLIVADAVIEVLKVPPAVALSGLEN LVGLLFVITGIIAWAYPLWKRAPKLKLALPSPSKIGPWALLFLALMAFGYLWAVRKASRGNYPPDNPIDDIIRAVIEWLA SRRR
Specific function: Unknown
COG id: COG4827
COG function: function code R; Predicted transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42614; Mature: 42614
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHGVIAAFTTYLGASAALMLRYHSVGVSEALTYGAVYGMAAAAIGVGTGVMLTRVLGAR CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKRREVIRTVLEGTALSGVALLVGLLDVTAGAIAASSVALVYPSYRISRDLGVSPFKIVT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHCCCCCCCHHHHHH LLAVTSSVIVAALTSWMIVPAFADNPIYALAIAFFVFIVGLKTGLGIGFAGFQLRRGAMV HHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH IAALSGILIPAIIGLSHLVSKFMKTALAMQRYALLGHALLGLFLIGLGIFIARKWAVEGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AKDLSKLGAFVVAVPCPICLTGVALSIAMYAEIGALNVTQAALVLWTCFVSTAYATLIVA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH DAVIEVLKVPPAVALSGLENLVGLLFVITGIIAWAYPLWKRAPKLKLALPSPSKIGPWAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH LFLALMAFGYLWAVRKASRGNYPPDNPIDDIIRAVIEWLASRRR HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFHGVIAAFTTYLGASAALMLRYHSVGVSEALTYGAVYGMAAAAIGVGTGVMLTRVLGAR CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKRREVIRTVLEGTALSGVALLVGLLDVTAGAIAASSVALVYPSYRISRDLGVSPFKIVT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHCCCCCCCHHHHHH LLAVTSSVIVAALTSWMIVPAFADNPIYALAIAFFVFIVGLKTGLGIGFAGFQLRRGAMV HHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH IAALSGILIPAIIGLSHLVSKFMKTALAMQRYALLGHALLGLFLIGLGIFIARKWAVEGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AKDLSKLGAFVVAVPCPICLTGVALSIAMYAEIGALNVTQAALVLWTCFVSTAYATLIVA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH DAVIEVLKVPPAVALSGLENLVGLLFVITGIIAWAYPLWKRAPKLKLALPSPSKIGPWAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH LFLALMAFGYLWAVRKASRGNYPPDNPIDDIIRAVIEWLASRRR HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA