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The map label for this gene is yvrN [H]

Identifier: 19746917

GI number: 19746917

Start: 1747333

End: 1748550

Strand: Reverse

Name: yvrN [H]

Synonym: spyM18_2087

Alternate gene names: 19746917

Gene position: 1748550-1747333 (Counterclockwise)

Preceding gene: 19746918

Following gene: 19746916

Centisome position: 92.27

GC content: 37.85

Gene sequence:

>1218_bases
ATGGAAGATATTATTGCAGCTTTAGGCTCTATATTATCACACAAGATGCGGTCAATTTTGACAATGCTAGGGATTATTAT
CGGTATTGGTGCCATTATCGCAATCTTTTCAATCATCGAAGGTAATACCGAAAATACCAAAAGACAGTTGATTGGTGGCA
GCAATAACACTATTAACATTGTGTTTAACAAAAAAAGTAGTATTGACCCTAAATTTCCAGACAAGTCAAATGCTAAAAAA
CCAGACTATCTTCCTTTTATGGCTGAAGAAGAGCTTAGCAAAATACAGCAAGTCAAAGGCGTCAAAAACGCCCTGATCTC
ATATGGTATTGATGACAAAGTCTACCATCTAGGCCAAAAATCATCTGCAAAGATTTCTGCCATCACAAAAAACGTAGCTG
AAGTGAGACGCATGAGATTTATTAAAGGCAGTGACTTTTCAGACAAAGACTTTATTGACCAAAAACAGGTGATTTACCTT
GAAAAAAGCTTGTATGAGTCACTATTTCCAAAAGACGATGGTCTTGGAAAATTTGTCGAAGTGATGGGAAATCCCTTCAG
GGTCATTGGAGTGTTTGAATCAAAAGAACAAAGTGGTCTCACAAGTGGGACTGAGAAAATTGCTTATATCCCGCTACATC
AGTGGTATAATATTAATGGTGTAGTGGATGCGACACCTGAGATCACGATCCAGACCTATCGCGCAGATGACCTCAAACTT
GTGGCAAAGCGTGTCAGTGATATGCTCAATCAAACGATCCCTAAATCAGATTATATGTTTGGTGTCATGAACCTTAAAGA
ATTTGAACGCCAACTAGACAACCTAAACAAATCTAATTTTGTGTTATTAGCTGGTATTGCTAGCATCTCTCTTATTGTAG
GTGGTATTGGTGTGATGAACATTATGCTAGTATCAGTTACCGAAAGAACGAGAGAAATTGGGATCAAAAAAGCGCTTGGC
GCTAGACGTAAGCTTATTTTAAAACAATTTTTAATTGAAGCAGTCATTCTAACCTTGCTAGGTGGTGTGATAGGGGTTAT
TTCAGGGATGGTATCAGGATTGATCATCACAAGATCACTCGAATATCCCTATATCCTATCCTTGTTCTCAGTTGTCTTGA
GTTTAGCGTTTTGTTGTATTATAGGGATTGTCTTTGGACTATTACCAGCCATTAAAGCGTCTAAGCTAGACCCAATTGAA
GCATTGCGATTTGAATAA

Upstream 100 bases:

>100_bases
CATCACACACGAGCCTGAAGTAGCTGCCTTATGCAAAAAGACAGTGATCCTAAGAGATGGTAATATAGAACATTCCGATA
TAGAGTAAAGGGGGAAAATA

Downstream 100 bases:

>100_bases
TCAACCAAACAAGCATAAAAGTCAAAAAGGATGACCTTTTGATGTCATCCTTAGCTGCTTGATACACTAAACGCCAATCT
AGAAAGGGAAGTTATGTTTA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MEDIIAALGSILSHKMRSILTMLGIIIGIGAIIAIFSIIEGNTENTKRQLIGGSNNTINIVFNKKSSIDPKFPDKSNAKK
PDYLPFMAEEELSKIQQVKGVKNALISYGIDDKVYHLGQKSSAKISAITKNVAEVRRMRFIKGSDFSDKDFIDQKQVIYL
EKSLYESLFPKDDGLGKFVEVMGNPFRVIGVFESKEQSGLTSGTEKIAYIPLHQWYNINGVVDATPEITIQTYRADDLKL
VAKRVSDMLNQTIPKSDYMFGVMNLKEFERQLDNLNKSNFVLLAGIASISLIVGGIGVMNIMLVSVTERTREIGIKKALG
ARRKLILKQFLIEAVILTLLGGVIGVISGMVSGLIITRSLEYPYILSLFSVVLSLAFCCIIGIVFGLLPAIKASKLDPIE
ALRFE

Sequences:

>Translated_405_residues
MEDIIAALGSILSHKMRSILTMLGIIIGIGAIIAIFSIIEGNTENTKRQLIGGSNNTINIVFNKKSSIDPKFPDKSNAKK
PDYLPFMAEEELSKIQQVKGVKNALISYGIDDKVYHLGQKSSAKISAITKNVAEVRRMRFIKGSDFSDKDFIDQKQVIYL
EKSLYESLFPKDDGLGKFVEVMGNPFRVIGVFESKEQSGLTSGTEKIAYIPLHQWYNINGVVDATPEITIQTYRADDLKL
VAKRVSDMLNQTIPKSDYMFGVMNLKEFERQLDNLNKSNFVLLAGIASISLIVGGIGVMNIMLVSVTERTREIGIKKALG
ARRKLILKQFLIEAVILTLLGGVIGVISGMVSGLIITRSLEYPYILSLFSVVLSLAFCCIIGIVFGLLPAIKASKLDPIE
ALRFE
>Mature_405_residues
MEDIIAALGSILSHKMRSILTMLGIIIGIGAIIAIFSIIEGNTENTKRQLIGGSNNTINIVFNKKSSIDPKFPDKSNAKK
PDYLPFMAEEELSKIQQVKGVKNALISYGIDDKVYHLGQKSSAKISAITKNVAEVRRMRFIKGSDFSDKDFIDQKQVIYL
EKSLYESLFPKDDGLGKFVEVMGNPFRVIGVFESKEQSGLTSGTEKIAYIPLHQWYNINGVVDATPEITIQTYRADDLKL
VAKRVSDMLNQTIPKSDYMFGVMNLKEFERQLDNLNKSNFVLLAGIASISLIVGGIGVMNIMLVSVTERTREIGIKKALG
ARRKLILKQFLIEAVILTLLGGVIGVISGMVSGLIITRSLEYPYILSLFSVVLSLAFCCIIGIVFGLLPAIKASKLDPIE
ALRFE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=428, Percent_Identity=32.4766355140187, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 44736; Mature: 44736

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDIIAALGSILSHKMRSILTMLGIIIGIGAIIAIFSIIEGNTENTKRQLIGGSNNTINI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEE
VFNKKSSIDPKFPDKSNAKKPDYLPFMAEEELSKIQQVKGVKNALISYGIDDKVYHLGQK
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
SSAKISAITKNVAEVRRMRFIKGSDFSDKDFIDQKQVIYLEKSLYESLFPKDDGLGKFVE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
VMGNPFRVIGVFESKEQSGLTSGTEKIAYIPLHQWYNINGVVDATPEITIQTYRADDLKL
HCCCCEEEEEEEECCHHCCCCCCCCEEEEEEHHHCCCCCEEEECCCCEEEEEECCHHHHH
VAKRVSDMLNQTIPKSDYMFGVMNLKEFERQLDNLNKSNFVLLAGIASISLIVGGIGVMN
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
IMLVSVTERTREIGIKKALGARRKLILKQFLIEAVILTLLGGVIGVISGMVSGLIITRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
EYPYILSLFSVVLSLAFCCIIGIVFGLLPAIKASKLDPIEALRFE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MEDIIAALGSILSHKMRSILTMLGIIIGIGAIIAIFSIIEGNTENTKRQLIGGSNNTINI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEE
VFNKKSSIDPKFPDKSNAKKPDYLPFMAEEELSKIQQVKGVKNALISYGIDDKVYHLGQK
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
SSAKISAITKNVAEVRRMRFIKGSDFSDKDFIDQKQVIYLEKSLYESLFPKDDGLGKFVE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
VMGNPFRVIGVFESKEQSGLTSGTEKIAYIPLHQWYNINGVVDATPEITIQTYRADDLKL
HCCCCEEEEEEEECCHHCCCCCCCCEEEEEEHHHCCCCCEEEECCCCEEEEEECCHHHHH
VAKRVSDMLNQTIPKSDYMFGVMNLKEFERQLDNLNKSNFVLLAGIASISLIVGGIGVMN
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
IMLVSVTERTREIGIKKALGARRKLILKQFLIEAVILTLLGGVIGVISGMVSGLIITRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
EYPYILSLFSVVLSLAFCCIIGIVFGLLPAIKASKLDPIEALRFE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751; 3145906 [H]