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The map label for this gene is garK [H]

Identifier: 19746824

GI number: 19746824

Start: 1639281

End: 1640282

Strand: Reverse

Name: garK [H]

Synonym: spyM18_1973

Alternate gene names: 19746824

Gene position: 1640282-1639281 (Counterclockwise)

Preceding gene: 19746828

Following gene: 19746823

Centisome position: 86.56

GC content: 41.12

Gene sequence:

>1002_bases
ATGAAAATTTTGGTAGCCATAGATTCTTTTAAGGGATCGGTAACGTCTCCAGAACTTAACACTAGTGTAGCTCAAGCCCT
TCTTTCTGTCGATAAGCAGTTAGTTATTGAAACAAGAGCTATCGCTGATGGAGGAGAAGGAAGTTTAGCAGCCCTCTCAC
AAACCGTGGCGGGGAGGTGGCATCAAGTAAAAACCATTGATCTATTAAGACGCCCGATTAAAGTCGCTTATTATCGTCAC
GCAAAGCAAGCTTTTATTGAATCTGCGAGTATTATTGGTATTGATAAGGTCACCCCCAATTCAGTAACCTATGCACAAGC
CACTTCCTATGGTTTGGGTTTGGCAGTTAAAGATGCCATTCAAAAAGGAGCTACTCAAATCGAAATCATGCTAGGAGGAA
CAGGCACTTCTGATGGTGGCAAAGGTTTTTTGGAAAGTTTAAACTATGATTTCATGACAGGAAGATCTTATCTTGATACT
TTAGCATCACCTGTTACGCTATTAGGGCTGACTGATGTGACCAATCCATATCATGGCCCTCAAGGATTTGCTGCGGTCTT
TGGCCCTCAAAAAGGTGGGCATCTTAGTCAAATTGAAGAAACTGATCAAATTGCAAGTAACTTTGCTAAAAAAGTTTTTT
ACCAAACAACCATTGATTTACAGACAATACCAGGAAGTGGAGCAGCTGGAGGATTAGGAGGTGCCATTGTCCTATTAGGA
GGCACCTTAACTAGTGGTTTTAGCAGGATTGCAGAGCTACTAAATCTGGATAATTCCCTTCAGTCTTGTGATTTAGTTAT
TACTGGAGAAGGATGCCTGGATACACAATCACAATCTGGTAAGGGACCTGTTGCGATTGCAAGAATGGCTAAAAAATATC
AAGTTCCAACGATTGCTCTATGCGGTTCTGTAAAGATTGAGACAGGACTAGCAGCAGAAGACTTTTTGGCTGTTTTTTTC
AATACAACAGCAGCCAATTTCCTTAGAAGCAGCGATAGATAA

Upstream 100 bases:

>100_bases
AAATAGATAAAAAACTTAAGACAGATCTAGCTTGACTATTAATAGGGTTTTAAAGGACGATAATCTGCTACAATATACAG
AAAAGGAATTTATTGAAGAT

Downstream 100 bases:

>100_bases
AACAACAACACTTTCTAATATCAAAATATTAGCAGCTAACCTTATGCTATTGATAGCTCAGTTTAATAAGTAAACTCATC
TATTTTCGATTGTGTAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKILVAIDSFKGSVTSPELNTSVAQALLSVDKQLVIETRAIADGGEGSLAALSQTVAGRWHQVKTIDLLRRPIKVAYYRH
AKQAFIESASIIGIDKVTPNSVTYAQATSYGLGLAVKDAIQKGATQIEIMLGGTGTSDGGKGFLESLNYDFMTGRSYLDT
LASPVTLLGLTDVTNPYHGPQGFAAVFGPQKGGHLSQIEETDQIASNFAKKVFYQTTIDLQTIPGSGAAGGLGGAIVLLG
GTLTSGFSRIAELLNLDNSLQSCDLVITGEGCLDTQSQSGKGPVAIARMAKKYQVPTIALCGSVKIETGLAAEDFLAVFF
NTTAANFLRSSDR

Sequences:

>Translated_333_residues
MKILVAIDSFKGSVTSPELNTSVAQALLSVDKQLVIETRAIADGGEGSLAALSQTVAGRWHQVKTIDLLRRPIKVAYYRH
AKQAFIESASIIGIDKVTPNSVTYAQATSYGLGLAVKDAIQKGATQIEIMLGGTGTSDGGKGFLESLNYDFMTGRSYLDT
LASPVTLLGLTDVTNPYHGPQGFAAVFGPQKGGHLSQIEETDQIASNFAKKVFYQTTIDLQTIPGSGAAGGLGGAIVLLG
GTLTSGFSRIAELLNLDNSLQSCDLVITGEGCLDTQSQSGKGPVAIARMAKKYQVPTIALCGSVKIETGLAAEDFLAVFF
NTTAANFLRSSDR
>Mature_333_residues
MKILVAIDSFKGSVTSPELNTSVAQALLSVDKQLVIETRAIADGGEGSLAALSQTVAGRWHQVKTIDLLRRPIKVAYYRH
AKQAFIESASIIGIDKVTPNSVTYAQATSYGLGLAVKDAIQKGATQIEIMLGGTGTSDGGKGFLESLNYDFMTGRSYLDT
LASPVTLLGLTDVTNPYHGPQGFAAVFGPQKGGHLSQIEETDQIASNFAKKVFYQTTIDLQTIPGSGAAGGLGGAIVLLG
GTLTSGFSRIAELLNLDNSLQSCDLVITGEGCLDTQSQSGKGPVAIARMAKKYQVPTIALCGSVKIETGLAAEDFLAVFF
NTTAANFLRSSDR

Specific function: Unknown

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI145693185, Length=346, Percent_Identity=32.9479768786127, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1786724, Length=324, Percent_Identity=29.6296296296296, Blast_Score=124, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 34946; Mature: 34946

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVAIDSFKGSVTSPELNTSVAQALLSVDKQLVIETRAIADGGEGSLAALSQTVAGRW
CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCCCHHHHHHHHHHCCH
HQVKTIDLLRRPIKVAYYRHAKQAFIESASIIGIDKVTPNSVTYAQATSYGLGLAVKDAI
HEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEHHCCCCCHHHHHHH
QKGATQIEIMLGGTGTSDGGKGFLESLNYDFMTGRSYLDTLASPVTLLGLTDVTNPYHGP
HCCCEEEEEEECCCCCCCCCHHHHHHCCCCHHCCHHHHHHHHCCEEEEEEHHCCCCCCCC
QGFAAVFGPQKGGHLSQIEETDQIASNFAKKVFYQTTIDLQTIPGSGAAGGLGGAIVLLG
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEC
GTLTSGFSRIAELLNLDNSLQSCDLVITGEGCLDTQSQSGKGPVAIARMAKKYQVPTIAL
CHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
CGSVKIETGLAAEDFLAVFFNTTAANFLRSSDR
ECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKILVAIDSFKGSVTSPELNTSVAQALLSVDKQLVIETRAIADGGEGSLAALSQTVAGRW
CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCCCHHHHHHHHHHCCH
HQVKTIDLLRRPIKVAYYRHAKQAFIESASIIGIDKVTPNSVTYAQATSYGLGLAVKDAI
HEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEHHCCCCCHHHHHHH
QKGATQIEIMLGGTGTSDGGKGFLESLNYDFMTGRSYLDTLASPVTLLGLTDVTNPYHGP
HCCCEEEEEEECCCCCCCCCHHHHHHCCCCHHCCHHHHHHHHCCEEEEEEHHCCCCCCCC
QGFAAVFGPQKGGHLSQIEETDQIASNFAKKVFYQTTIDLQTIPGSGAAGGLGGAIVLLG
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEC
GTLTSGFSRIAELLNLDNSLQSCDLVITGEGCLDTQSQSGKGPVAIARMAKKYQVPTIAL
CHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
CGSVKIETGLAAEDFLAVFFNTTAANFLRSSDR
ECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1705543; 9278503 [H]