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The map label for this gene is ynaK [H]

Identifier: 19746670

GI number: 19746670

Start: 1477961

End: 1478479

Strand: Reverse

Name: ynaK [H]

Synonym: spyM18_1784

Alternate gene names: 19746670

Gene position: 1478479-1477961 (Counterclockwise)

Preceding gene: 19746671

Following gene: 19746669

Centisome position: 78.02

GC content: 34.3

Gene sequence:

>519_bases
ATGGAGTTTGTGGACAAAAAATTAAGTGAAATAACACCTTATAAAAATAACCCTAGAAACAATGATGAGGCCGTTGAACC
AGTTGCTGAATCTATTAAAGAGTTTGGTTTTAAAGTGCCTATTGTCGTTGATAAAAACGGCGAAATCGTGAACGGCCACA
CTCGTTATAAAGCAGCCCAAAAATTAGGGCTAGAAACAGTTCCTGTTATTGTCGCAGATGACTTATCTGAAGAGCAAATC
AAAGCGTTCAGACTTGCTGACAATAAAGTTAGTGAGATTGCGGTTTGGGATTTAGATTTGTTAAATGAAGAATTAAATGA
CATTTTAGATCTTGATATGTCTGTTTTTGGCTTTGAATTAGAAATAGATGACGAGAATCAAGAGAATTTAGATGCTGATT
TTGAAGAAATAGAAGATGACTCTGTTTTAATAGTAGAAGCTGAAAGCGAAGAGGAATTGGAAAAGTTATATGACGAATTT
GTAGAAAGAGGTTTCAAATGCCGAGTTTCAATATTGTAA

Upstream 100 bases:

>100_bases
GGTAGGCAATAGGCTTAGCATTCATTTGCTATTTATCTATGGTTAACCAATTAGTCATCACATTGTGGTGACTTTTTATT
ATGTAAAAAAGGAATAAAAC

Downstream 100 bases:

>100_bases
AAAAGAACGACTTAAATAGTTCTTTTAAAGTTTCCAAAGTAACGGCTGACTTTGATGTCGGCGCAGAACACGTTAGAGAA
CATTTTATTGGAAAAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MEFVDKKLSEITPYKNNPRNNDEAVEPVAESIKEFGFKVPIVVDKNGEIVNGHTRYKAAQKLGLETVPVIVADDLSEEQI
KAFRLADNKVSEIAVWDLDLLNEELNDILDLDMSVFGFELEIDDENQENLDADFEEIEDDSVLIVEAESEEELEKLYDEF
VERGFKCRVSIL

Sequences:

>Translated_172_residues
MEFVDKKLSEITPYKNNPRNNDEAVEPVAESIKEFGFKVPIVVDKNGEIVNGHTRYKAAQKLGLETVPVIVADDLSEEQI
KAFRLADNKVSEIAVWDLDLLNEELNDILDLDMSVFGFELEIDDENQENLDADFEEIEDDSVLIVEAESEEELEKLYDEF
VERGFKCRVSIL
>Mature_172_residues
MEFVDKKLSEITPYKNNPRNNDEAVEPVAESIKEFGFKVPIVVDKNGEIVNGHTRYKAAQKLGLETVPVIVADDLSEEQI
KAFRLADNKVSEIAVWDLDLLNEELNDILDLDMSVFGFELEIDDENQENLDADFEEIEDDSVLIVEAESEEELEKLYDEF
VERGFKCRVSIL

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787628, Length=80, Percent_Identity=42.5, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 19672; Mature: 19672

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFVDKKLSEITPYKNNPRNNDEAVEPVAESIKEFGFKVPIVVDKNGEIVNGHTRYKAAQ
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEECCHHHHHHHH
KLGLETVPVIVADDLSEEQIKAFRLADNKVSEIAVWDLDLLNEELNDILDLDMSVFGFEL
HCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHEEEEE
EIDDENQENLDADFEEIEDDSVLIVEAESEEELEKLYDEFVERGFKCRVSIL
EECCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MEFVDKKLSEITPYKNNPRNNDEAVEPVAESIKEFGFKVPIVVDKNGEIVNGHTRYKAAQ
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEECCHHHHHHHH
KLGLETVPVIVADDLSEEQIKAFRLADNKVSEIAVWDLDLLNEELNDILDLDMSVFGFEL
HCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHEEEEE
EIDDENQENLDADFEEIEDDSVLIVEAESEEELEKLYDEFVERGFKCRVSIL
EECCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]