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The map label for this gene is yidA [H]

Identifier: 19746608

GI number: 19746608

Start: 1425300

End: 1426124

Strand: Reverse

Name: yidA [H]

Synonym: spyM18_1711

Alternate gene names: 19746608

Gene position: 1426124-1425300 (Counterclockwise)

Preceding gene: 19746609

Following gene: 19746606

Centisome position: 75.26

GC content: 42.06

Gene sequence:

>825_bases
ATGATTCAACTAATTGCAATTGATTTGGACGGCACCTTATTAAACCAGGACAAACAGATTCCAAAAGAGAATATCACAGC
CATCCAAGAAGCAGCTCAGTCAGGCTTAAAAATTGTCTTATGTACAGGCCGGCCTCAGTCAGGGACAAGACCCTATTTTG
ACCAATTAGGTTTGACACAAGAGGAATTCCTCATTATCAATAATGGCTGTAGTACTTATAGTAGTCCTGACTGGCAATTA
CGCCATTCAAAAATGTTGAAGATTTCAGATATTGAATTGCTGGAAGAGCTAAGCCAAAGTTTTCCAGATATTTACCTGAC
TTTAACTGAGGAAAACGATTATTTGGTGCTTGAAGAAGAAGTGCCAGACCTTGTGCAGGAAGATGGAGATTTGGTATTTA
CCATTGTCAAGCCTGTCTCCTTAGCAGAGCTGTCGGACACTCCTCGCCTGATTTTTCAAGCCATGTACTTAGGAGAAAAA
GCTGCGCTAGATGCCTTTGAACGTGCGGTGAGAAATCAGCTTAGTCAGAGTTTCCATGTTGTTCGTAGCCAAGATAATAT
TTTAGAAATTCTCCCTCAGGGAGTCAGCAAGGCATCGGCTCTCAAAGAATTAGTAGAAGATTTGGGTTTAACTGCTGACC
AAGTGATGGCTATTGGGGATGCTCCCAATGACATTGAGATGTTAACTTATGCTGGTTTAGGAGTTGCTATGGAAAATGCT
TCAGCAGCTATCAAGCCATTAGCTGACAAAGTCACTTTGACTAATGATATGGCGGGTGTGGCCCAGGCTATCCGTCAGTT
TGCACTTGCAGCTCAAAAAGACTAA

Upstream 100 bases:

>100_bases
GAATGTTATGCCTTGGTTGTTTTACTCACGACTTTACGCATGATTGGCAACCGTAAAAAATGGAACCTCCCTAAAATCAA
ATGGAAAGAGGAAAGATAGG

Downstream 100 bases:

>100_bases
CTATTAACGTAAAAAGGTTCCTTTTGGGAACCTTTTTACGTTAATAGAGGCAAGCCCATAGCAGCCATTTCTTCGGCAGG
AACGATCATGTCATCTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQEEFLIINNGCSTYSSPDWQL
RHSKMLKISDIELLEELSQSFPDIYLTLTEENDYLVLEEEVPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEK
AALDAFERAVRNQLSQSFHVVRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA
SAAIKPLADKVTLTNDMAGVAQAIRQFALAAQKD

Sequences:

>Translated_274_residues
MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQEEFLIINNGCSTYSSPDWQL
RHSKMLKISDIELLEELSQSFPDIYLTLTEENDYLVLEEEVPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEK
AALDAFERAVRNQLSQSFHVVRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA
SAAIKPLADKVTLTNDMAGVAQAIRQFALAAQKD
>Mature_274_residues
MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQEEFLIINNGCSTYSSPDWQL
RHSKMLKISDIELLEELSQSFPDIYLTLTEENDYLVLEEEVPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEK
AALDAFERAVRNQLSQSFHVVRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA
SAAIKPLADKVTLTNDMAGVAQAIRQFALAAQKD

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=269, Percent_Identity=34.5724907063197, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786982, Length=277, Percent_Identity=28.5198555956679, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87081741, Length=249, Percent_Identity=26.5060240963855, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48994981, Length=274, Percent_Identity=26.2773722627737, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87081790, Length=264, Percent_Identity=23.1060606060606, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787043, Length=283, Percent_Identity=25.0883392226148, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30098; Mature: 30098

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQ
CEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCH
EEFLIINNGCSTYSSPDWQLRHSKMLKISDIELLEELSQSFPDIYLTLTEENDYLVLEEE
HHEEEEECCCCCCCCCCCEEHHCCCEEEHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHH
VPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEKAALDAFERAVRNQLSQSFHV
CHHHHHCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA
HCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCHHEEEECCCCEEECCC
SAAIKPLADKVTLTNDMAGVAQAIRQFALAAQKD
HHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQ
CEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCH
EEFLIINNGCSTYSSPDWQLRHSKMLKISDIELLEELSQSFPDIYLTLTEENDYLVLEEE
HHEEEEECCCCCCCCCCCEEHHCCCEEEHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHH
VPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEKAALDAFERAVRNQLSQSFHV
CHHHHHCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA
HCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCHHEEEECCCCEEECCC
SAAIKPLADKVTLTNDMAGVAQAIRQFALAAQKD
HHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]