Click here to switch to the map view.

The map label for this gene is 19746523

Identifier: 19746523

GI number: 19746523

Start: 1323879

End: 1325324

Strand: Reverse

Name: 19746523

Synonym: spyM18_1598

Alternate gene names: NA

Gene position: 1325324-1323879 (Counterclockwise)

Preceding gene: 19746524

Following gene: 19746522

Centisome position: 69.94

GC content: 39.49

Gene sequence:

>1446_bases
ATGAAAAAGTGGCAAAAAATCGTGTGTGTGACTGGAACTGTGCTTGCAGCGTCTAGTTTAGCAGCCTGCGAAAGCAAGTC
AGCATCAAAGGATAGTGATGTCAAATTATTGATGTACCAAGTTGGTGACAAACCTGATAACTTCGATGAATTGATGACAA
TTGCTAACAAGCGCATCAAAGAAAAAACAGGTGCAACGGTTGACCTTCAATACATCGGTTGGGGGGACTGGGATGATAAA
ATGAGCACCATCATTGCCTCTGGTGAAAACTACGACATTGCTTTTGCCAATAATTATGTGGTCAATGCACAAAAAGGTGC
TTTTGCTGATTTGACAACGTTAATGCCAAAATACGCTAAGAAAACGTATAAAAACTTAGACCCAGCCTATATTAAAGGAA
ATACTATTGACGGTAAACTCTATGCCTTCCCAGTAGATGCCAACGTTTATGCCCAACAGGTGCTTTCTTTCAATAAAGAA
CTAGTGGACAAATATGGCCTTGACATTTCAAACATTAAGTCCTATGCAGATGCTGAAAATGTCTTGAAACAATTCCACGA
AAAAGAACCAAATACAGCAGCTTTTGCTATTGGTCAAGTCTTTAGTATGTCAGGTGACTATGACTACCCATTAACCAAAA
CCCAACCCTTTGCTGTGAAAATTGATGAAGGCAAGCCAACCATCATTAATCAGTATGAAGATGAGTCCTTTAAAAACAAT
CTCCGCTTGATGCACAAATGGTATAAAGAAGGTTTGATTCCAACAGATGCAGCGACCAATACAGAAGGTTATCCCCTTGA
AGGAAACACTTGGTTTATGCGTGAAGAAACCCAAGGTCCTATGGACTATGGCGATACTATCTTGACCAATGCTGCAGGAA
AAGACATCGTGTCTCGTCCATTGACTAAACCGCTAAAAACCACATCACAAGCACAAATGGCAAACTTTGTGGTATCAAGC
GTATCTAAAAACAAAGAAAAAGCAGTTGAAGTCCTTTCTCTTCTTAATAGCGATCCCGAATTGTTAAATGGGCTTGTTTA
TGGTGTCGAAGGCAAAGCTTGGGAAAAAATTGGCGACAAGAAAATCAAACTGCTCGATGGCTATCAACCAAAAATGCACA
TGGGTGCTTGGAATACTGGTAACAATAAAATCCTTTACACTCAAGAATCTGTTACTGACGACATGATTGCTAAACGTGAC
CAATCAATCAAGGATGCTAAAGAATCTCCAATCCTTGGTTTCACTGTTGACACAAAAGTTATTAAAACGGAATTGTCAAA
TATTTCAAATGTCATGAACCGATATAAAGCAAGTATCAATACTGGTACAGTGGATCCTGACGAAGCCCTTCCAAAACTTC
TTGCAGACCTCAAAGGTGCTGGTTGGGACAAGGTGCAAAAAGAAGTTCAAAAACAATTGGACGACTTTGTAGCTAAAGAC
AAGTAA

Upstream 100 bases:

>100_bases
TTGGTGGGGTGAAGGAATAGGACTTAAGGAACTGGTCACAAGACCAGATTTTATCTAATCATTAGTAACAAAAGAAAACA
TTTTTTAGGAGGCTTCACTT

Downstream 100 bases:

>100_bases
GGCATTCATTTTCTTGATTATAAGTTGAGGGCTGGGAAATCTCAGCTCTTTTCTTCTGATGAGTGGAAAAAACGGATCAT
CAAATAAGTGGAAGTTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKKWQKIVCVTGTVLAASSLAACESKSASKDSDVKLLMYQVGDKPDNFDELMTIANKRIKEKTGATVDLQYIGWGDWDDK
MSTIIASGENYDIAFANNYVVNAQKGAFADLTTLMPKYAKKTYKNLDPAYIKGNTIDGKLYAFPVDANVYAQQVLSFNKE
LVDKYGLDISNIKSYADAENVLKQFHEKEPNTAAFAIGQVFSMSGDYDYPLTKTQPFAVKIDEGKPTIINQYEDESFKNN
LRLMHKWYKEGLIPTDAATNTEGYPLEGNTWFMREETQGPMDYGDTILTNAAGKDIVSRPLTKPLKTTSQAQMANFVVSS
VSKNKEKAVEVLSLLNSDPELLNGLVYGVEGKAWEKIGDKKIKLLDGYQPKMHMGAWNTGNNKILYTQESVTDDMIAKRD
QSIKDAKESPILGFTVDTKVIKTELSNISNVMNRYKASINTGTVDPDEALPKLLADLKGAGWDKVQKEVQKQLDDFVAKD
K

Sequences:

>Translated_481_residues
MKKWQKIVCVTGTVLAASSLAACESKSASKDSDVKLLMYQVGDKPDNFDELMTIANKRIKEKTGATVDLQYIGWGDWDDK
MSTIIASGENYDIAFANNYVVNAQKGAFADLTTLMPKYAKKTYKNLDPAYIKGNTIDGKLYAFPVDANVYAQQVLSFNKE
LVDKYGLDISNIKSYADAENVLKQFHEKEPNTAAFAIGQVFSMSGDYDYPLTKTQPFAVKIDEGKPTIINQYEDESFKNN
LRLMHKWYKEGLIPTDAATNTEGYPLEGNTWFMREETQGPMDYGDTILTNAAGKDIVSRPLTKPLKTTSQAQMANFVVSS
VSKNKEKAVEVLSLLNSDPELLNGLVYGVEGKAWEKIGDKKIKLLDGYQPKMHMGAWNTGNNKILYTQESVTDDMIAKRD
QSIKDAKESPILGFTVDTKVIKTELSNISNVMNRYKASINTGTVDPDEALPKLLADLKGAGWDKVQKEVQKQLDDFVAKD
K
>Mature_481_residues
MKKWQKIVCVTGTVLAASSLAACESKSASKDSDVKLLMYQVGDKPDNFDELMTIANKRIKEKTGATVDLQYIGWGDWDDK
MSTIIASGENYDIAFANNYVVNAQKGAFADLTTLMPKYAKKTYKNLDPAYIKGNTIDGKLYAFPVDANVYAQQVLSFNKE
LVDKYGLDISNIKSYADAENVLKQFHEKEPNTAAFAIGQVFSMSGDYDYPLTKTQPFAVKIDEGKPTIINQYEDESFKNN
LRLMHKWYKEGLIPTDAATNTEGYPLEGNTWFMREETQGPMDYGDTILTNAAGKDIVSRPLTKPLKTTSQAQMANFVVSS
VSKNKEKAVEVLSLLNSDPELLNGLVYGVEGKAWEKIGDKKIKLLDGYQPKMHMGAWNTGNNKILYTQESVTDDMIAKRD
QSIKDAKESPILGFTVDTKVIKTELSNISNVMNRYKASINTGTVDPDEALPKLLADLKGAGWDKVQKEVQKQLDDFVAKD
K

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53572; Mature: 53572

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWQKIVCVTGTVLAASSLAACESKSASKDSDVKLLMYQVGDKPDNFDELMTIANKRIK
CCCHHEEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
EKTGATVDLQYIGWGDWDDKMSTIIASGENYDIAFANNYVVNAQKGAFADLTTLMPKYAK
HHCCCEEEEEEECCCCCHHHHHHHEECCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHH
KTYKNLDPAYIKGNTIDGKLYAFPVDANVYAQQVLSFNKELVDKYGLDISNIKSYADAEN
HHHCCCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VLKQFHEKEPNTAAFAIGQVFSMSGDYDYPLTKTQPFAVKIDEGKPTIINQYEDESFKNN
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCHHHHHH
LRLMHKWYKEGLIPTDAATNTEGYPLEGNTWFMREETQGPMDYGDTILTNAAGKDIVSRP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCHHHHCC
LTKPLKTTSQAQMANFVVSSVSKNKEKAVEVLSLLNSDPELLNGLVYGVEGKAWEKIGDK
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHEEECCCCHHHHHHCCC
KIKLLDGYQPKMHMGAWNTGNNKILYTQESVTDDMIAKRDQSIKDAKESPILGFTVDTKV
EEEEECCCCCCEEECCEECCCCEEEEECHHHHHHHHHHCCCHHHHHCCCCEEEEEECHHH
IKTELSNISNVMNRYKASINTGTVDPDEALPKLLADLKGAGWDKVQKEVQKQLDDFVAKD
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
K
C
>Mature Secondary Structure
MKKWQKIVCVTGTVLAASSLAACESKSASKDSDVKLLMYQVGDKPDNFDELMTIANKRIK
CCCHHEEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
EKTGATVDLQYIGWGDWDDKMSTIIASGENYDIAFANNYVVNAQKGAFADLTTLMPKYAK
HHCCCEEEEEEECCCCCHHHHHHHEECCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHH
KTYKNLDPAYIKGNTIDGKLYAFPVDANVYAQQVLSFNKELVDKYGLDISNIKSYADAEN
HHHCCCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VLKQFHEKEPNTAAFAIGQVFSMSGDYDYPLTKTQPFAVKIDEGKPTIINQYEDESFKNN
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCHHHHHH
LRLMHKWYKEGLIPTDAATNTEGYPLEGNTWFMREETQGPMDYGDTILTNAAGKDIVSRP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCHHHHCC
LTKPLKTTSQAQMANFVVSSVSKNKEKAVEVLSLLNSDPELLNGLVYGVEGKAWEKIGDK
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHEEECCCCHHHHHHCCC
KIKLLDGYQPKMHMGAWNTGNNKILYTQESVTDDMIAKRDQSIKDAKESPILGFTVDTKV
EEEEECCCCCCEEECCEECCCCEEEEECHHHHHHHHHHCCCHHHHHCCCCEEEEEECHHH
IKTELSNISNVMNRYKASINTGTVDPDEALPKLLADLKGAGWDKVQKEVQKQLDDFVAKD
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA