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The map label for this gene is yqaK [H]

Identifier: 19746432

GI number: 19746432

Start: 1234910

End: 1235839

Strand: Reverse

Name: yqaK [H]

Synonym: spyM18_1495

Alternate gene names: 19746432

Gene position: 1235839-1234910 (Counterclockwise)

Preceding gene: 19746433

Following gene: 19746431

Centisome position: 65.22

GC content: 37.96

Gene sequence:

>930_bases
ATGGCAAATCAATTATCAACATACACACACAAACAATTTTTTAACGCACCAACAGTTCAAAAAGCTTTTGATGACGTTTG
GAAAGGCGCCGGGACACAGTTCGCAGTAAGCATCTTGTCAGTACTACAAGGTAGTCAAAGTTTGAAATCGGCATCTAATA
AATCTATTTATGCAGCAGCTATGAAAGCAGCCGTGTTAAATCTGCCTATTGAGCCAAGCTTAGGAAGGGCCTATTTAGTT
CCGTACAAAGGTCAAGCACAATTCCAATTAGGCTATAAAGGGTTGATTGAGTTAGCGCAGCGCAGCGGACAATATAAAAA
TATTAATGCAGGTATCGTCTATAAATCACAATTAATTTCTTACAACCCTTTGTTCGAGGAATTAATCCTTGACTTTAGCA
AGCCACAAGATGAAATTGTAGGGTATTTTGCCGCTTTTAAACTTTTCAATGGATTCGAGAAAGTTTCTTTTTGGACAGTA
GAAAAAGTAACTGCACATGGAAAGAAATTTTCAAAATCGTTTGCTAGCGGTCCTTGGAAAACAGACTTTGATGCAATGGC
TCAAAAAACTATTTTAAAAGATATTTTGAGTAAATATGGTCCGTTATCAGTTGAGATGCAGAAAGCTATCGAGGAAGATA
ATCAAGATTCAACGATTTCTATCCCAAAAGACATTACCCCACAAGAAGCAAATAGCCTTGACGACCTAATTGGTCACCAG
AACGAAAATAAGGATGCTCCTAACAATTTAAAAGACGTAACTGAAGATTTACATGACGAAGAAGAAAAAACGCTCACAGA
CGAAAATAAGACGGTTTTAGAAGATACGTCTTATCCAGCAGATGAGGTTCCCGATTTTGACCAAGAGACTGGTGAAGTAT
TAGCTAGCGAAGGCAACCTCTTTGATAATCTCGGAGACTTGATGCCATGA

Upstream 100 bases:

>100_bases
AATTTATTGATGGCGAATCAGTGCCAGAGTTAACAAAAGAGCAAAAAGTTAAAAGTATGGTAAACGGAATGTTTGAGCAG
GTTTTTGGAGGTGAATAGAG

Downstream 100 bases:

>100_bases
CGAAGTTAGACTTGCTCGGAAAGGACTATTATAGCCGTGAATCAGCGATTAAATACTGGTCTATTAGTCAGTACAAGCGT
TTTAGAGAATGTGAGGCAAG

Product: recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MANQLSTYTHKQFFNAPTVQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNKSIYAAAMKAAVLNLPIEPSLGRAYLV
PYKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLISYNPLFEELILDFSKPQDEIVGYFAAFKLFNGFEKVSFWTV
EKVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISIPKDITPQEANSLDDLIGHQ
NENKDAPNNLKDVTEDLHDEEEKTLTDENKTVLEDTSYPADEVPDFDQETGEVLASEGNLFDNLGDLMP

Sequences:

>Translated_309_residues
MANQLSTYTHKQFFNAPTVQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNKSIYAAAMKAAVLNLPIEPSLGRAYLV
PYKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLISYNPLFEELILDFSKPQDEIVGYFAAFKLFNGFEKVSFWTV
EKVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISIPKDITPQEANSLDDLIGHQ
NENKDAPNNLKDVTEDLHDEEEKTLTDENKTVLEDTSYPADEVPDFDQETGEVLASEGNLFDNLGDLMP
>Mature_308_residues
ANQLSTYTHKQFFNAPTVQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNKSIYAAAMKAAVLNLPIEPSLGRAYLVP
YKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLISYNPLFEELILDFSKPQDEIVGYFAAFKLFNGFEKVSFWTVE
KVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISIPKDITPQEANSLDDLIGHQN
ENKDAPNNLKDVTEDLHDEEEKTLTDENKTVLEDTSYPADEVPDFDQETGEVLASEGNLFDNLGDLMP

Specific function: Binds To Single-Stranded DNA And Also Promotes The Renaturation Of Complementary Single-Stranded DNA. Function In Recombination. Has A Function Similar To That Of Lambda Redb. [C]

COG id: COG3723

COG function: function code L; Recombinational DNA repair protein (RecE pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787611, Length=191, Percent_Identity=30.8900523560209, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004590
- InterPro:   IPR018330 [H]

Pfam domain/function: PF03837 RecT [H]

EC number: NA

Molecular weight: Translated: 34334; Mature: 34202

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQLSTYTHKQFFNAPTVQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNKSIYAAA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHH
MKAAVLNLPIEPSLGRAYLVPYKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLIS
HHHHHHCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCC
YNPLFEELILDFSKPQDEIVGYFAAFKLFNGFEKVSFWTVEKVTAHGKKFSKSFASGPWK
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISIPKDITPQEANSLDDLIGHQ
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCC
NENKDAPNNLKDVTEDLHDEEEKTLTDENKTVLEDTSYPADEVPDFDQETGEVLASEGNL
CCCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCH
FDNLGDLMP
HHHHHHCCC
>Mature Secondary Structure 
ANQLSTYTHKQFFNAPTVQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNKSIYAAA
CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHH
MKAAVLNLPIEPSLGRAYLVPYKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLIS
HHHHHHCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCC
YNPLFEELILDFSKPQDEIVGYFAAFKLFNGFEKVSFWTVEKVTAHGKKFSKSFASGPWK
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISIPKDITPQEANSLDDLIGHQ
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCC
NENKDAPNNLKDVTEDLHDEEEKTLTDENKTVLEDTSYPADEVPDFDQETGEVLASEGNL
CCCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCH
FDNLGDLMP
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]