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The map label for this gene is 19746188

Identifier: 19746188

GI number: 19746188

Start: 1016036

End: 1016677

Strand: Reverse

Name: 19746188

Synonym: spyM18_1210

Alternate gene names: NA

Gene position: 1016677-1016036 (Counterclockwise)

Preceding gene: 19746189

Following gene: 19746187

Centisome position: 53.65

GC content: 34.74

Gene sequence:

>642_bases
GTGATAAGTCCTAAAAAAGAGATAACAAGTTCAAAATATCAAAAAATTGCTATTTCAGTAGCTCAGCGTATCGCAAATGG
CGAATATGAAGTGGGCGAAAAGTTAAAGTCAAGAACTACTATCGCCTCGACATTTAATGTATCACCAGAAACGGCTCGTA
AAGGTCTGAATATTTTAGCTGACTTGAAAATTTTGACTTTAAAACATGGTAGTGGAGCTATTGTGCTGTCAAAAGAAAGA
GCTATTGAGTTTATAAATCAATACGAATCAACCCATTCCATCGCTGTTTTAAAAGAAAAAATACGTGAGACTATTAATGA
TCAGGGAAAAGCAATGGAAAAAATGGCTGTTTTGGTCAATGATTTTTTAATGCAAAGTCAATCTGTTAGTAAGCAATACC
CATTAGCACCTTATGAGATTATTTGTAGTCAAGATTCGGAACATTTTGGCAAATCTATTGGTGTGTTAAATATCTGGCAC
CAGACAGGAGCAACTATCGTCGCTATTGAACATGCTGGTCAGTTTATCGTTTCACCAGGTCCTTATTCTGTTATTGAAAA
AGGCGATCATATTTATTTCGTTGGTGATGAGTCAGTCATTTCACGAATGAAGACCTTTTTTAATTTACGAAAAGGATTAT
AA

Upstream 100 bases:

>100_bases
TTTTTGTCACGGTTAAAAAGACACGGACTATTGTCATCTCTCTAAAAATATGATTTAATTAGATAGAAATTTTTCAAATT
GTTAGAAAGGAGTAAATTAA

Downstream 100 bases:

>100_bases
GTTTGAGGGCCCACCTCAAACTTTTTTTGTTGCTGTTGAGCATTATTAAAAGAGGCAGATCATCATGGTTTGTCTTTCCA
AAATATCTGTTTAGACAGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; TrkA Domain-Containing Protein; Regulatory Protein; Transcriptional Repressor BusR; GntR Family Regulatory Protein; TrkA-C Domain Protein; Regulatory Protein GntR HTH; TrkA-C Domain-Containing Protein; Fused Transcriptional Regulator/Membrane Protein; Gntr-Family Transcriptional Regulator; GntR Family Transcription Regulator

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MISPKKEITSSKYQKIAISVAQRIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILADLKILTLKHGSGAIVLSKER
AIEFINQYESTHSIAVLKEKIRETINDQGKAMEKMAVLVNDFLMQSQSVSKQYPLAPYEIICSQDSEHFGKSIGVLNIWH
QTGATIVAIEHAGQFIVSPGPYSVIEKGDHIYFVGDESVISRMKTFFNLRKGL

Sequences:

>Translated_213_residues
MISPKKEITSSKYQKIAISVAQRIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILADLKILTLKHGSGAIVLSKER
AIEFINQYESTHSIAVLKEKIRETINDQGKAMEKMAVLVNDFLMQSQSVSKQYPLAPYEIICSQDSEHFGKSIGVLNIWH
QTGATIVAIEHAGQFIVSPGPYSVIEKGDHIYFVGDESVISRMKTFFNLRKGL
>Mature_213_residues
MISPKKEITSSKYQKIAISVAQRIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILADLKILTLKHGSGAIVLSKER
AIEFINQYESTHSIAVLKEKIRETINDQGKAMEKMAVLVNDFLMQSQSVSKQYPLAPYEIICSQDSEHFGKSIGVLNIWH
QTGATIVAIEHAGQFIVSPGPYSVIEKGDHIYFVGDESVISRMKTFFNLRKGL

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23662; Mature: 23662

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPKKEITSSKYQKIAISVAQRIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCHHHHHHCCHHHC
DLKILTLKHGSGAIVLSKERAIEFINQYESTHSIAVLKEKIRETINDQGKAMEKMAVLVN
CEEEEEEECCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
DFLMQSQSVSKQYPLAPYEIICSQDSEHFGKSIGVLNIWHQTGATIVAIEHAGQFIVSPG
HHHHHHHHCCCCCCCCCCEEEECCCHHHHCCCCCEEEEEECCCCEEEEEECCCEEEECCC
PYSVIEKGDHIYFVGDESVISRMKTFFNLRKGL
CHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISPKKEITSSKYQKIAISVAQRIANGEYEVGEKLKSRTTIASTFNVSPETARKGLNILA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCHHHHHHCCHHHC
DLKILTLKHGSGAIVLSKERAIEFINQYESTHSIAVLKEKIRETINDQGKAMEKMAVLVN
CEEEEEEECCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
DFLMQSQSVSKQYPLAPYEIICSQDSEHFGKSIGVLNIWHQTGATIVAIEHAGQFIVSPG
HHHHHHHHCCCCCCCCCCEEEECCCHHHHCCCCCEEEEEECCCCEEEEEECCCEEEECCC
PYSVIEKGDHIYFVGDESVISRMKTFFNLRKGL
CHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA