Click here to switch to the map view.

The map label for this gene is ywfL [H]

Identifier: 19746153

GI number: 19746153

Start: 980871

End: 981722

Strand: Reverse

Name: ywfL [H]

Synonym: spyM18_1172

Alternate gene names: 19746153

Gene position: 981722-980871 (Counterclockwise)

Preceding gene: 19746158

Following gene: 19746152

Centisome position: 51.81

GC content: 39.32

Gene sequence:

>852_bases
GTGAAAGGAAGAATTGTGATAACTATTAGAGATTTAGCGTCACTGCCGATTTTTGTTTACGGTGATGGAAATAAAAAAGT
TCCAGGAGCTTTGAGTCCTTTTGTGTGGACAGAGGTGTTTTTAAAAACTATCAATCAAGAACCTAATCAACTGATCTTAC
ATATTTGGCCGATGACAAGAACAGTTATATTAGGAATGTTAGATAGACAGCTTCCCTACTTTGAGCTGGCTAAAAAAGAG
ATTGGCAATAATGGTTATGTTCCTGTTACTCGTAATATTGGCGGTTTGGCTGTTGTCGCTGATGATGGGATTTTGAATTT
TTCGCTTGTTATTCCAGACCATTTTTCGGAATCTATCAGTATTAGTAATGCTTATCTAATAATGGTTGATGTCATTAGAG
AGAGTTTTTCGGATTATTATCAGCGTATTGAATATCACGAAATTAAAAATTCTTATTGTCCTGGTAATTTTGATCTTAGT
ATTGCAGGCCGCAAGTTTGCAGGTATCGCCCAGCGTCGTATCAAAAAGGGAATTGTTGTGTCTATTTACTTGAGCGTTTG
TGGGGATCAAGCAGCGCGTGGTCAACTCATCAAGGCTTTTTATGAGGCTGGAACACAAGGAGAAGTTACCAAGGTTAATT
ACCCTCAAATTGATCCAGAATGCATGGCAACTCTTTCAGAACTCCTTGAGACGCCTTTTACAGTGGCAGAAGTTCTTGAA
CGTCTTCGGTTGACCTTGCGACAGCTTGGCTTTTCCCTCACGGAAAAAAGTCCAGATCAAGCCTTACTGACTAATTTTGA
TGCTGTCTATGAACGGATGCAGCTAGAAGTCGTTAGAAAGGAAGGCAAATGA

Upstream 100 bases:

>100_bases
GTAATAGATTTCTAGTAATTAAAACGAAGTTCTGGAAAGCAAGACACTATAGTAGCTAAAATCTAAATTTTAAGGTAAAA
TAGAGCAAGCGGTTTCAAGT

Downstream 100 bases:

>100_bases
AAGAAAGATTTAGTCCTTTATTTGAGCCTTTGACTTTGCCAAATGGGAGTCAATTGGATAATCGCTTTGTTTTGTCTCCT
ATGGTGACCAACTCATCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKKE
IGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLS
IAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKAFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE
RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK

Sequences:

>Translated_283_residues
MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKKE
IGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLS
IAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKAFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE
RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK
>Mature_283_residues
MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKKE
IGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLS
IAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKAFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE
RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 31859; Mature: 31859

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR
CCCEEEEEEECCHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHH
TVILGMLDRQLPYFELAKKEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS
HHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEEEEEECCCCCCCEE
ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV
CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEE
SIYLSVCGDQAARGQLIKAFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE
EEEEEHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH
RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR
CCCEEEEEEECCHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHH
TVILGMLDRQLPYFELAKKEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS
HHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEEEEEECCCCCCCEE
ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV
CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEE
SIYLSVCGDQAARGQLIKAFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE
EEEEEHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH
RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]