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The map label for this gene is rex [H]

Identifier: 19746069

GI number: 19746069

Start: 897257

End: 897901

Strand: Reverse

Name: rex [H]

Synonym: spyM18_1081

Alternate gene names: 19746069

Gene position: 897901-897257 (Counterclockwise)

Preceding gene: 19746070

Following gene: 19746068

Centisome position: 47.38

GC content: 38.91

Gene sequence:

>645_bases
GTGGTTATTGACAAATCTATTCCAAAAGCGACTGCAAAGCGCTTATCACTTTATTACCGTATTTTTAAACGATTCCATGC
TGACCAAGTTGAAAAAGCCAGTTCTAAACAAATTGCAGATGCAATGGGAATTGACTCTGCTACTGTACGCCGTGACTTTT
CTTATTTTGGAGAATTGGGGCGTCGTGGGTTTGGCTATGATGTTACCAAATTGATGAATTTTTTTGCTGACTTGCTTAAT
GATCACTCTACAACAAACGTTATCTTAGTTGGATGCGGTAATATAGGGCGTGCTCTATTACATTACCGCTTCCATGATCG
TAATAAGATGCAAATTGCCATGGGTTTTGATACCGATGATAACGCTCTTGTTGGTACTAAAACAGCTGATAATATTCCAG
TCCATGGTATCTCATCCGTCAAAGAACGGATTGCGAACACTGACATTGAAACGGCTATCTTAACGGTTCCCAGCATTCAT
GCTCAAGAAGTTACTGATCAACTTATTGAAGCAGGAATCAAAGGAATCTTGAGTTTTGCTCCTGTTCACCTACAAGTTCC
TAAAGGAGTTATTGTTCAATCTGTCGATTTGACCAGTGAGCTCCAGACACTACTCTATTTTATGAATCAAAATCATCTAG
ATTAA

Upstream 100 bases:

>100_bases
TTAACTCATACAAAAACAATCAAAATGTTGCATTTTTCACAATCTTTTTGTTACAATAAAGACAGACATATTTAACGAGA
AATCTACAAGGAGTAAAATA

Downstream 100 bases:

>100_bases
GGAGGTATAATGACCAAACCGATTATTGGAATAACTGCAAATCAAAGACTAAATATGGCTTTGGATAATCTCCCATGGTC
ATATGCACCTACTGGATTTG

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVIDKSIPKATAKRLSLYYRIFKRFHADQVEKASSKQIADAMGIDSATVRRDFSYFGELGRRGFGYDVTKLMNFFADLLN
DHSTTNVILVGCGNIGRALLHYRFHDRNKMQIAMGFDTDDNALVGTKTADNIPVHGISSVKERIANTDIETAILTVPSIH
AQEVTDQLIEAGIKGILSFAPVHLQVPKGVIVQSVDLTSELQTLLYFMNQNHLD

Sequences:

>Translated_214_residues
MVIDKSIPKATAKRLSLYYRIFKRFHADQVEKASSKQIADAMGIDSATVRRDFSYFGELGRRGFGYDVTKLMNFFADLLN
DHSTTNVILVGCGNIGRALLHYRFHDRNKMQIAMGFDTDDNALVGTKTADNIPVHGISSVKERIANTDIETAILTVPSIH
AQEVTDQLIEAGIKGILSFAPVHLQVPKGVIVQSVDLTSELQTLLYFMNQNHLD
>Mature_214_residues
MVIDKSIPKATAKRLSLYYRIFKRFHADQVEKASSKQIADAMGIDSATVRRDFSYFGELGRRGFGYDVTKLMNFFADLLN
DHSTTNVILVGCGNIGRALLHYRFHDRNKMQIAMGFDTDDNALVGTKTADNIPVHGISSVKERIANTDIETAILTVPSIH
AQEVTDQLIEAGIKGILSFAPVHLQVPKGVIVQSVDLTSELQTLLYFMNQNHLD

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state [H]

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N [H]

EC number: NA

Molecular weight: Translated: 23828; Mature: 23828

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIDKSIPKATAKRLSLYYRIFKRFHADQVEKASSKQIADAMGIDSATVRRDFSYFGELG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
RRGFGYDVTKLMNFFADLLNDHSTTNVILVGCGNIGRALLHYRFHDRNKMQIAMGFDTDD
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCC
NALVGTKTADNIPVHGISSVKERIANTDIETAILTVPSIHAQEVTDQLIEAGIKGILSFA
CCEEECCCCCCCCCCCHHHHHHHHHCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHC
PVHLQVPKGVIVQSVDLTSELQTLLYFMNQNHLD
CEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVIDKSIPKATAKRLSLYYRIFKRFHADQVEKASSKQIADAMGIDSATVRRDFSYFGELG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
RRGFGYDVTKLMNFFADLLNDHSTTNVILVGCGNIGRALLHYRFHDRNKMQIAMGFDTDD
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCC
NALVGTKTADNIPVHGISSVKERIANTDIETAILTVPSIHAQEVTDQLIEAGIKGILSFA
CCEEECCCCCCCCCCCHHHHHHHHHCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHC
PVHLQVPKGVIVQSVDLTSELQTLLYFMNQNHLD
CEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA