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The map label for this gene is ypfJ [H]

Identifier: 19745859

GI number: 19745859

Start: 670283

End: 671197

Strand: Reverse

Name: ypfJ [H]

Synonym: spyM18_0834

Alternate gene names: 19745859

Gene position: 671197-670283 (Counterclockwise)

Preceding gene: 19745864

Following gene: 19745826

Centisome position: 35.42

GC content: 44.26

Gene sequence:

>915_bases
ATGAAAACGGATGATTTGAGAGAAAGTCAACAGGTTGAAGATAGACGTGGTCAATCGTCTGGTTCTTTTGGGGGCGGCCT
AGGGGGCGGTCTCCTGCTTCAATTACTCTTTTCACGAGGAGGTTGGAAAACCAAGCTGGTTATTCTTCTCCTTCTCCTAG
TTATGGGAGGAGGTGGCCTATCTGGTGTTTTAGGAGGCAAGCCTTCTTCTACCAACAACAATGCCTATCAATCAAGCCAA
GTAACGCGTACAAATGGTGACAAGGCTAGTCAAGAACAGGTTTCTTTTGTCAGTAAGGTCTTCGCCTCTACCGAGGACTA
TTGGACTAAGACATTTCGTGAGAAAGGGTTAACTTATCATAAACCAACATTAGTTCTATATACTGGAGCAACTCAAACCG
CTTGTGGCAGGGGGCAAGCCTCTTCTGGTCCTTTCTATTGCCCAGGCGATCAAAAAGTGTATTTAGATATTTCTTTTTAT
AATGAACTATCAACCAAGTACGGCGCAAAAGGTGATTTCGCTATGGCCTATGTGATTGCTCATGAAGTTGGCCACCACAT
CCAAAATGAATTGGGAATTATGGATAATTACGCTAGCGCTAGACAAGGAAAATCAAAGGCTAAAGCCAATCAACTCAACG
TCAAGTTGGAATTACAAGCTGATTACTATGCTGGTGCCTGGGCTAATTATGTTCAAGGGCAAGGCCTTTTGGAAAAAGGA
GACATTGAGGAGGCAATGGCAGCAGCTCACGCAGTTGGGGATGATACTCTGCAAGAAGAAACCTATGGCAGAACCGTTCC
TGATAGTTTTACACATGGCACTTCTAAGCAACGCCAACGTTGGTTTGACCGAGGTTACCAATATGGCGACTTTGAGCATG
GTGATACCTTTAGTATCCCGTATAGTAAGCTTTAG

Upstream 100 bases:

>100_bases
CCTATTGCTTTTCCTATTTTTAGTTATAATCTCATCATAAAAATAGCAATTCTAATAGAATTATTTTATAATAAAATCAA
GAAATAGATGGGAGAAACTT

Downstream 100 bases:

>100_bases
GGAAATGGTGACGTATTGATAATAGTCACACTTAGAAAAAAACAAACAAGTGCTGTGCTTGTTTGGTTTTTTTCTTCTAA
TATCATAAACTCTTACCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKTDDLRESQQVEDRRGQSSGSFGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSSQ
VTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFY
NELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEKG
DIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL

Sequences:

>Translated_304_residues
MKTDDLRESQQVEDRRGQSSGSFGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSSQ
VTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFY
NELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEKG
DIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL
>Mature_304_residues
MKTDDLRESQQVEDRRGQSSGSFGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSSQ
VTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFY
NELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEKG
DIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=299, Percent_Identity=47.1571906354515, Blast_Score=264, Evalue=7e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 33261; Mature: 33261

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDDLRESQQVEDRRGQSSGSFGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGL
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
SGVLGGKPSSTNNNAYQSSQVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYH
CCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEE
KPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFYNELSTKYGAKGDFAMAYVIA
CCEEEEEECCCHHHCCCCCCCCCCEECCCCCEEEEEEEEHHHHHHHCCCCCCHHHHHHHH
HEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEKG
HHHHHHHHHHHCCHHCHHHHHCCHHHHHHHHEEEEEEEECCCCCCHHHHHHCCCCCCCCC
DIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIP
CHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCC
YSKL
HHCC
>Mature Secondary Structure
MKTDDLRESQQVEDRRGQSSGSFGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGL
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
SGVLGGKPSSTNNNAYQSSQVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYH
CCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEE
KPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFYNELSTKYGAKGDFAMAYVIA
CCEEEEEECCCHHHCCCCCCCCCCEECCCCCEEEEEEEEHHHHHHHCCCCCCHHHHHHHH
HEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEKG
HHHHHHHHHHHCCHHCHHHHHCCHHHHHHHHEEEEEEEECCCCCCHHHHHHCCCCCCCCC
DIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIP
CHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCC
YSKL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]