Click here to switch to the map view.

The map label for this gene is yfdH [C]

Identifier: 19745627

GI number: 19745627

Start: 452010

End: 452936

Strand: Reverse

Name: yfdH [C]

Synonym: spyM18_0568

Alternate gene names: 19745627

Gene position: 452936-452010 (Counterclockwise)

Preceding gene: 19745628

Following gene: 19745626

Centisome position: 23.9

GC content: 38.08

Gene sequence:

>927_bases
ATGACACTACTATCTATCATTGTCCCCTGCTTTAATGAAGAAGCAAACATTCTCCCTTATTTTGAAGAAATGCATCAACT
AGAAACGTCCATGACCAACCAACTTGCTTTTGAATACATTTTTATTGATGATGGTTCTAAGGATAACACCTTGGGTATTT
TGCGTGAGCTAGCTGCTCGCTTTCCAAATGTGCATTATCTGTCTTTTTCACGCCATTTTGGCAAGGAAGCTGGGCTCTTA
GCTGGACTAAAAGAAGCCAAAGGCAATTACATTACTGTGATGGATGTGGATCTGCAAGATCCACCCGAACTTTTGCCAGT
TATGTACGCTAAGCTAAAAGAAGGTTATGACATCGTTGGCACCAGGCGCCAAAATAGACAAGGAGAACCACTAATTCGTT
CAATGTGTTCGAATCTATTTTATGGACTGATCAAACACTTATCAGATACTGAAATGGTCAATGGAGTTCGGGATTATCGG
TTAATGACCAGACAAGTCGTTGATAGCATTCTTGAGTTGGGAGAGGTTAATCGTTTTTCAAAAGGGATCTTTTCGTGGGT
TGGTTATCGTATCACCTATCTTAGTTTTGAAAACCAAAAACGCAAATATGGAAAAAGTCGTTGGCATTTTTGGGAGTTGC
TCCGATATTCTTTAGATGGCTTTATCAACTTTTCAGAAATGCCGTTAACCATTGCTACCTGGACAGGGACTTTCAGCTTT
TTGATTTCTATTTTCGCCATCTTATTTATCATTATCAGAAAGATACTCTTTGGTGATCCTGTCTCTGGTTGGGCCAGCAC
TGTCTCTATTATTTTATTCATGGGAGGCATTCAGCTCTTTTGCATGGGTATTATTGGAAAATATATTTCAAAAATATTCC
TTGAAACTAAAAAAAGGCCTCTCTATATTATCAAAGAAAAACATTAA

Upstream 100 bases:

>100_bases
TTAACCTGACGATTGGGACAATCTCATTATTAACAGAGTTTTGAAATATCTCAGCTTTTGTGTTACAATTGCCCTAAAAT
TCCATTTGAAAGAAAAGTCT

Downstream 100 bases:

>100_bases
ATTAAAACATTTTTCTCATCAATCGTTTCCTACTCCTTCTGTGCGCGAAGCTTTCTTTTTAAGCCCGTTATACCAAATGA
TAATGACCTTTCCAAAATAG

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYIFIDDGSKDNTLGILRELAARFPNVHYLSFSRHFGKEAGLL
AGLKEAKGNYITVMDVDLQDPPELLPVMYAKLKEGYDIVGTRRQNRQGEPLIRSMCSNLFYGLIKHLSDTEMVNGVRDYR
LMTRQVVDSILELGEVNRFSKGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDGFINFSEMPLTIATWTGTFSF
LISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRPLYIIKEKH

Sequences:

>Translated_308_residues
MTLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYIFIDDGSKDNTLGILRELAARFPNVHYLSFSRHFGKEAGLL
AGLKEAKGNYITVMDVDLQDPPELLPVMYAKLKEGYDIVGTRRQNRQGEPLIRSMCSNLFYGLIKHLSDTEMVNGVRDYR
LMTRQVVDSILELGEVNRFSKGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDGFINFSEMPLTIATWTGTFSF
LISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRPLYIIKEKH
>Mature_307_residues
TLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYIFIDDGSKDNTLGILRELAARFPNVHYLSFSRHFGKEAGLLA
GLKEAKGNYITVMDVDLQDPPELLPVMYAKLKEGYDIVGTRRQNRQGEPLIRSMCSNLFYGLIKHLSDTEMVNGVRDYRL
MTRQVVDSILELGEVNRFSKGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDGFINFSEMPLTIATWTGTFSFL
ISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRPLYIIKEKH

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=302, Percent_Identity=38.7417218543046, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1788588, Length=312, Percent_Identity=29.4871794871795, Blast_Score=147, Evalue=8e-37,
Organism=Saccharomyces cerevisiae, GI6325441, Length=120, Percent_Identity=35.8333333333333, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35634; Mature: 35503

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYIFIDDGSKDNTLGILRELAAR
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHH
FPNVHYLSFSRHFGKEAGLLAGLKEAKGNYITVMDVDLQDPPELLPVMYAKLKEGYDIVG
CCCEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEC
TRRQNRQGEPLIRSMCSNLFYGLIKHLSDTEMVNGVRDYRLMTRQVVDSILELGEVNRFS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDGFINFSEMPLTIATWTGTFSF
HHHHHHHHHEEEEEEECHHHHHHCCHHHHHHHHHHHHHHHCEEECCCCEEEEEHHHHHHH
LISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LYIIKEKH
EEEEECCC
>Mature Secondary Structure 
TLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYIFIDDGSKDNTLGILRELAAR
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHH
FPNVHYLSFSRHFGKEAGLLAGLKEAKGNYITVMDVDLQDPPELLPVMYAKLKEGYDIVG
CCCEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEC
TRRQNRQGEPLIRSMCSNLFYGLIKHLSDTEMVNGVRDYRLMTRQVVDSILELGEVNRFS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDGFINFSEMPLTIATWTGTFSF
HHHHHHHHHEEEEEEECHHHHHHCCHHHHHHHHHHHHHHHCEEECCCCEEEEEHHHHHHH
LISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LYIIKEKH
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]