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The map label for this gene is 19745400

Identifier: 19745400

GI number: 19745400

Start: 225220

End: 225636

Strand: Reverse

Name: 19745400

Synonym: spyM18_0253

Alternate gene names: NA

Gene position: 225636-225220 (Counterclockwise)

Preceding gene: 19745407

Following gene: 19745391

Centisome position: 11.91

GC content: 40.29

Gene sequence:

>417_bases
ATGCAAGATTATTATACACCAAAAGGCAAACAATTGACAATCCATGAGCGTCGGCAAATTCAACGCTGGAAGCTGGAAGG
TCGCTCTAATCGTGAAATTGCTCGCTTACTAGGTAAGGCCCCCCAGACCATTCATAATGAAATCAAGCGAGGATTGGTTA
GGCAACAGGTTCGTAAAGGAAAGTTTGAAGCCGTTTATTCTGCTCAACATGCTCAGTTGGTCTATCAAGAAAATCGCAAG
CGTTCTGTTAGACCCATTAGACAGCGTAAGCAAGATAGGGAGGCTATTGAACATTGGATCAATCATTATCCTAAACGACT
CTTCAACTACAAGTCGCCAGTAGAAATGTTAAAACTGGCTAACTTCAACTTGAAATTTGGCCTTATTAATATCATGCAAG
AATTCAATCTAAGATAA

Upstream 100 bases:

>100_bases
GAAAAATTCTAAAATGAACTTAGCCACTTTTAAGGTATGAAAAAAGCACCTCTAAGAGGTATACTTGTAGTTCACCACAA
ACACAAGGAAACTCAAAAAG

Downstream 100 bases:

>100_bases
ACTAATCAACATTCCTACTGAAAGGACATTTTACTTAATAACCATAACAAGAGCCAAAAACACTTATGAAACCATCATAA
GTGTTAAGTACATCAAAAAT

Product: transposase

Products: NA

Alternate protein names: Truncated Transposase; Truncated; Transposase-Like Protein IS; Transposase IS

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MQDYYTPKGKQLTIHERRQIQRWKLEGRSNREIARLLGKAPQTIHNEIKRGLVRQQVRKGKFEAVYSAQHAQLVYQENRK
RSVRPIRQRKQDREAIEHWINHYPKRLFNYKSPVEMLKLANFNLKFGLINIMQEFNLR

Sequences:

>Translated_138_residues
MQDYYTPKGKQLTIHERRQIQRWKLEGRSNREIARLLGKAPQTIHNEIKRGLVRQQVRKGKFEAVYSAQHAQLVYQENRK
RSVRPIRQRKQDREAIEHWINHYPKRLFNYKSPVEMLKLANFNLKFGLINIMQEFNLR
>Mature_138_residues
MQDYYTPKGKQLTIHERRQIQRWKLEGRSNREIARLLGKAPQTIHNEIKRGLVRQQVRKGKFEAVYSAQHAQLVYQENRK
RSVRPIRQRKQDREAIEHWINHYPKRLFNYKSPVEMLKLANFNLKFGLINIMQEFNLR

Specific function: Unknown

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16782; Mature: 16782

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDYYTPKGKQLTIHERRQIQRWKLEGRSNREIARLLGKAPQTIHNEIKRGLVRQQVRKG
CCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
KFEAVYSAQHAQLVYQENRKRSVRPIRQRKQDREAIEHWINHYPKRLFNYKSPVEMLKLA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
NFNLKFGLINIMQEFNLR
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDYYTPKGKQLTIHERRQIQRWKLEGRSNREIARLLGKAPQTIHNEIKRGLVRQQVRKG
CCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
KFEAVYSAQHAQLVYQENRKRSVRPIRQRKQDREAIEHWINHYPKRLFNYKSPVEMLKLA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
NFNLKFGLINIMQEFNLR
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA