| Definition | Vibrio fischeri MJ11 chromosome I, complete sequence. |
|---|---|
| Accession | NC_011184 |
| Length | 2,905,029 |
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The map label for this gene is gyrA
Identifier: 197335945
GI number:
Start: 1359055
End: 1361691
Strand: Direct
Name: gyrA
Synonym: VFMJ11_1283
Alternate gene names: NA
Gene position: NA
Preceding gene: 197335236
Following gene: 197335787
Centisome position: NA
GC content: NA
Gene sequence:
>2637_bases ATGAGCGATCTTGCTAAAGAGATCACGCCCGTAAATATTGAAGATGAGCTTCGAGGTTCTTACCTAGACTATGCGATGTC AGTAATCGTTGGTCGTGCTCTTCCCGATGTGCGTGATGGCCTAAAACCAGTACACCGCCGCGTTTTATTCGCAATGGATG TACTAGGTAATGATTGGAATAAACCATATAAAAAATCTGCCCGTGTTGTTGGCGATGTAATCGGTAAATATCACCCTCAT GGTGATAGTGCTGTTTATGACACCATCGTACGTATGGCGCAACCGTTCTCACTACGCTATATGCTAGTTGATGGCCAAGG TAACTTTGGTTCTATCGATGGTGACTCAGCGGCGGCGATGCGTTATACCGAAGTTCGTATGGCGAAAATCGCTCACGAAC TGTTGGCTGACCTAGATAAAGAAACTGTAGATTATGTTCCTAACTATGATGGTACAGAACAGATCCCTGCAGTATTACCA ACAAAGATCCCGAACCTACTTGTAAATGGTTCATCGGGTATCGCGGTTGGTATGGCAACAAACATCCCACCACACAACTT AACAGAAGTGGTAAATGGTTGTTTGGCTTTCATCGAAAATGAAGAAATCACGATCGATGAGCTAATGAACTATATCCCAG GTCCTGACTTCCCGACAGCTGCATTGATCAGTGGTCGTAAAGGCATCGTTGATGCTTATAAGACAGGTCGTGGTAAAGTT TACATGCGTTCTAAAGCAAATATCGAAGCCGACAAAAATGGTAAAGAAACCATTATTGTTACTGAGATCCCTTATCAAGT TAACAAAGCTCGCTTGATCGAAAAGATTGCTGAGCTAGTTAAAGATAAGAAAGTAGAAGGCATTTCAGCACTACGTGACG AATCTGATAAAGATGGTATGCGTATTGTTATTGAATGTAAGCGTGATGCAGTAGGTGAGGTTGTTCTTAATAACCTTTAC TCTCTGACTCAACTTCAAACTACATTCGGTATCAACATGGTTGCACTAGATAATGGTCAACCAAAACTATTCAACCTGAA AGAAATGTTGAAGTGTTTCGTTGATCACCGTCGTGAAGTAGTAACTCGCCGTACTATTTTTGAATTACGCAAAGCGCGTG ATCGTGCTCATATCCTTGAAGGTTTAGCACTAGCATTAGCGAACATCGATGAAATCATCGAATTGATCCGTAATGCACCA ACACCAGCAGAAGCAAAAGAAGGTCTAATCTCACGTGGTTGGGATTTAGGTAACGTTGCTTCAATGCTAGAGCGTGCTGG TACTGATGCTGCTCGTCCTGATTGGTTAGAGCCAGAGTTTGGTATTCGTGAAGGTAAATACTTCTTAACAGAACAACAAG CTCAAGCAATTCTAGAACTTCGTCTACACCGTTTAACTGGTTTAGAGCACGAGAAGATTTTAGATGAATACAAAGCACTA TTAGATGAAATCGCAGAGCTAATGCATATTCTTGCAAGCACTGAACGTCTAATGGAAGTGATCCGTGACGAATTAGTTAT GGTTCGCGACATGTACGGTGATGAGCGTCGCACTGAAATTGGTGCAGCGATCCATGACATCGACATGGAAGACCTAATTA CACAAGAAGATGTTGTCGTAACACTTTCTCGTGAAGGTTATGTTAAGTACCAAATTCTAAGCGATTACGAAGCACAACGT CGTGGTGGTAAAGGTAAGAGTGCAACTAAGATGAAAGATGAAGACTTCATCGAGCGTCTACTTGTTGCGAATACTCATGA TAATATCCTTTGTTTCTCTACACGTGGTAAAGCGTATAGCTTGAAAGTGTTCCAATTACCTCAAGCAAGTCGTACTGCTC GTGGTAAGCCAATCGTAAACATTCTTCCTCTAGAAGAAGGTGAGCGTATTACAGCGATTCTACCAGTATCTGAATACTCT GAAGATAAGTTTATCTTTATGGCAACAGGTGATGGTACTGTTAAGAAAACATCACTAGATCAATTTGCAAAAGTTCGTGC AAACGGCTTAATCGCAGTAAATCTACGTGAAGATGATTCACTAATCGGTGTTGATATCACTGATGGTTCAAGTGAAATCA TGCTGTTCTCTAAAGCAGGTAAAGTGGTTCGTTTCAACGAAGAACAAGTTCGTGGTATGGGCCGTACAGCTTCTGGTGTT CGTGGTATGAAACTGTCTGGTGAAGATCAGGTTGTTTCGTTAATCGTTCCTTCTAATGAAGGCGATATCTTAACAGTGAC TCAAAATGGTTACGGTAAACGTACTGTTCTTTCTGAGTACCCTGCGAAGAGCCGTGCAACGCAAGGTGTTGTATCTATCA AAGTTTCTGAACGTAACGGCAGTGTTGTCGGTGCAGTTCAAGCTGAAGATGGCGATGAATTCATGATGATCACTGACGCA GGTACGCTAGTACGTACTCGTGTATCAGAAGTTAGCCAAGTGGGTCGTAATACTCAAGGTGTAACATTGATCCGTACTTC TGAAAATGAAAATGTAGTTGCACTGCAACGCATTGATGAAGTTGAAGAAGCTGAAATCATTGAAGGCGAAGAGGGTGAAG TAACAGAGGCAACAGTAACAACTGAAGCAACTGAGACTCCTCAAGCTGATACCGATGCTGAGAGCACAGAAGAATAA
Upstream 100 bases:
>100_bases CACGTTTATCAGTATTAATTATCTTGGTGCATAGAAATAGTATTATTTGCTAAGGCAATTGATATTGATACGACAGAACT AATTGAGGGATATTGGCTCT
Downstream 100 bases:
>100_bases TTTATTCTGATGTAAAATAAAAAGCCCGCTTAGAAATAAGCGGGCTTTTTTTATTCATTAAATATATCGTTTTTGCTACA GGTAAACGGTGAATACAATG
Product: DNA gyrase, A subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>878_residues MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMDVLGNDWNKPYKKSARVVGDVIGKYHPH GDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLP TKIPNLLVNGSSGIAVGMATNIPPHNLTEVVNGCLAFIENEEITIDELMNYIPGPDFPTAALISGRKGIVDAYKTGRGKV YMRSKANIEADKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGMRIVIECKRDAVGEVVLNNLY SLTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELRKARDRAHILEGLALALANIDEIIELIRNAP TPAEAKEGLISRGWDLGNVASMLERAGTDAARPDWLEPEFGIREGKYFLTEQQAQAILELRLHRLTGLEHEKILDEYKAL LDEIAELMHILASTERLMEVIRDELVMVRDMYGDERRTEIGAAIHDIDMEDLITQEDVVVTLSREGYVKYQILSDYEAQR RGGKGKSATKMKDEDFIERLLVANTHDNILCFSTRGKAYSLKVFQLPQASRTARGKPIVNILPLEEGERITAILPVSEYS EDKFIFMATGDGTVKKTSLDQFAKVRANGLIAVNLREDDSLIGVDITDGSSEIMLFSKAGKVVRFNEEQVRGMGRTASGV RGMKLSGEDQVVSLIVPSNEGDILTVTQNGYGKRTVLSEYPAKSRATQGVVSIKVSERNGSVVGAVQAEDGDEFMMITDA GTLVRTRVSEVSQVGRNTQGVTLIRTSENENVVALQRIDEVEEAEIIEGEEGEVTEATVTTEATETPQADTDAESTEE
Sequences:
NA
Specific function: NA
COG id: COG0188
COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA