| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294853
Identifier: 197294853
GI number: 197294853
Start: 878885
End: 879328
Strand: Direct
Name: 197294853
Synonym: PAa_0840
Alternate gene names: NA
Gene position: 878885-879328 (Clockwise)
Preceding gene: 197294852
Following gene: NA
Centisome position: 99.88
GC content: 32.88
Gene sequence:
>444_bases TTGAACGTGACCCAATTACAGGAAAAGAAACCAAAGAAACTTGTTACAGACAAGATGGAACAATTAAATACATCACCGAA TACGACATTGAAACAGGTAACGAAACAAAACGTACCGACTACTACAAAGACGGCGAAACAATTGATTCTATTATTGAATC AGACCCCCCAAACAGGAAAATTAACCAAATCAACTTGGTACAAACTCGATGGCAAAACAATTAAATTCATCACAGAATTT AACCCAATTACAAGGAAAGAAACAAAATTAACCAAATACAAACCAGATGGATCAATTGATTACATCACTAAATATAAATA CGACCCAACCACAGGCGAACAAATTAAAAAAACTTATTACAAAGAAGATGGAACAATTTGGGGAATAGAAGATTACGAAA GCGAAACAAAAAAACAGGACCAAATAAACAATTTAAACCAATAA
Upstream 100 bases:
>100_bases AAAAATGATGGATCAAAGTTTATTTTTGAAGAAAACTTAGTCAAAGGAATTAGAATTAAATCAACCGGTTACAACCCCAA CAAAATAATAGAATTCAATA
Downstream 100 bases:
>100_bases TTATTTAAAACAAAATAAATGGTCAATCCTGCCATTATTATTTTTTAGTAAATATTTCTTTAAATTAATTAAATAATCTT CAATATCAAAATTGATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNVTQLQEKKPKKLVTDKMEQLNTSPNTTLKQVTKQNVPTTTKTAKQLILLLNQTPQTGKLTKSTWYKLDGKTIKFITEF NPITRKETKLTKYKPDGSIDYITKYKYDPTTGEQIKKTYYKEDGTIWGIEDYESETKKQDQINNLNQ
Sequences:
>Translated_147_residues MNVTQLQEKKPKKLVTDKMEQLNTSPNTTLKQVTKQNVPTTTKTAKQLILLLNQTPQTGKLTKSTWYKLDGKTIKFITEF NPITRKETKLTKYKPDGSIDYITKYKYDPTTGEQIKKTYYKEDGTIWGIEDYESETKKQDQINNLNQ >Mature_147_residues MNVTQLQEKKPKKLVTDKMEQLNTSPNTTLKQVTKQNVPTTTKTAKQLILLLNQTPQTGKLTKSTWYKLDGKTIKFITEF NPITRKETKLTKYKPDGSIDYITKYKYDPTTGEQIKKTYYKEDGTIWGIEDYESETKKQDQINNLNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17116; Mature: 17116
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTQLQEKKPKKLVTDKMEQLNTSPNTTLKQVTKQNVPTTTKTAKQLILLLNQTPQTGK CCCCCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC LTKSTWYKLDGKTIKFITEFNPITRKETKLTKYKPDGSIDYITKYKYDPTTGEQIKKTYY CCCCCEEEECCCEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHH KEDGTIWGIEDYESETKKQDQINNLNQ CCCCCEECCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNVTQLQEKKPKKLVTDKMEQLNTSPNTTLKQVTKQNVPTTTKTAKQLILLLNQTPQTGK CCCCCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC LTKSTWYKLDGKTIKFITEFNPITRKETKLTKYKPDGSIDYITKYKYDPTTGEQIKKTYY CCCCCEEEECCCEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHH KEDGTIWGIEDYESETKKQDQINNLNQ CCCCCEECCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA