| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is 197294841
Identifier: 197294841
GI number: 197294841
Start: 855518
End: 858328
Strand: Reverse
Name: 197294841
Synonym: PAa_0828
Alternate gene names: NA
Gene position: 858328-855518 (Counterclockwise)
Preceding gene: 197294842
Following gene: 197294840
Centisome position: 97.54
GC content: 32.62
Gene sequence:
>2811_bases ATGAATTTATCTAAAAGACCATTTTTCAAAAAAATTAATTTATATTTATTATCTCTTTTCATGTTGTTATCTGTAGGAAT GAGTGTGTTTGCTGAAGGCCTAACACAATTACCTAATTTTTTGAAACCAGCAGCTACAACACAAATTACTTTAACCGAAG CACAAATAACTAAACCTCAAGATCAAGATGTTTTAAATCTATTTGTAGCTGAAGGTAAAACAGTTGCAATTAATGATGTA ACAATTTCTTTGAACAACAACCAATTAACAGTAGCTCCTGTATCAGGTTCTACTAGATACCAAGGTAGTGTTGTATATAA TTTAGCTCCACAACAATTAGATACTGTTTTAAACCCAGATTCAATACAACCTAATTTAACTCCAGAACAAAGAAATAACC CTAACACAGAAGCTGTTTTAGGATTAGTTAGATTAAGTAACGATAACCCAGTTGTTACAAACGCTGATGTAACAATTTCT TTGAACAACAACCAATTAACAGTAGCTCCTGTATCAGGTTCTACTAGATACCAAGGTAGTGTTGTATATAATTTAGCTCC ACAACAATTAGATACTGTTTTAAACCCAGATTCAACACAACCTAATTTAACTCCAGAACAAAGAAATAACCCTAACACAG AAGCTGTTTTAGGATTAGTTAGATTAAGTAACGATAACCCAGTTGTTACAAACGCTGATGTAACAATTTCTTTGAACAAC AACCAATTAACAGTAGCCCCTGTATCAGGTTCTACTAGATACCAAGGTAATGTTGTATATAATTTAGCTCCACAACAATT AGATACTGTTTTAAACCCAGATTCAACACAACCTAATTTAACTCCAGAACAAAGAAATAACCCTAACACAGAAGCTGTTT TAGGATTAGTTAGATTAAGTAACGATAACCCAGTTGTTACAAACGCTGATGTAACAATTTCTTTGAACAACAACCAATTA ACAGTAGCTCCTGTATCAGGTTCTACTAGATACCAAGGTAGTGTTATATATAATTTAGCTCCACAACAATTAGATACTGT TTTAAACCCAGATTCAACACAACCTAATTTAACTCCAGAACAAAGAAATAACCCTAACACAGAAGCTGTTTTAGGATTAG TTAGATTAAGTAACGATAACCCAGTTGTTACAAACGCTGATGTAACAATTTCTTTGAACAACAACCAATTAACAGTAGCC CCTGTATCAGGTTCTACTAGATACCAAGGTAATGTTGTATATAATTTAGCTCCACAACAATTAGATACTGTTTTAAACCC AGATTCAACACAACCTAATTTAACTCCAGAACAAAGAAATAACCCTAACACAGAAGCTGTTTTAGGATTAGTTAGATTAA GTAACGATAACCCAGTTGTTACAAACGCTGATGTAACAATTTCTTTGAACAACAACCAATTAACAGTAGCTCCTGTATCA GGTTCTACTAGATACCAAGGTAGTGTTGTATATAATTTAGCTCCACAACAATTAGATACTGTTTTAAACCCAGATTCAAC ACAACCTAATTTAACTCCAGAACAAAGAAATAACCCTAACACAGAAGCTGTTTTAGGATTAGTTAGATTAAGTAACGATA ACCCAGTTGTTACAAACGCTGATGTAACAATTTCTTTGAACAACAACCAATTAACAGTAGCCCCTGTATCAGGTTCTACT AGATACCAAGGTAATGTTGTATATAATTTAGCTCCACAACAATTAGATACTGTTTTAAACCCAGATTCAACACAACCTAA TTTAACTCCAGAACAAAGAAATAACCCTAACACAGAAGCTGTTTTAGGATTAGTTAGATTAAGTAACGATAACCCAGTTG TTACAAACGCTGATGTAACAATTTCTTTGAACAACAACCAATTAACAGTAGCTCCTGTATCAGGTTCTACTAGATACCAA GGTAGTGTTGTATATAATTTAGCTCCACAACAATTAGATACTGTTTTAAACCCAGATTCAACACAACCTAATTTAACTCC AGAACAAAGAAATAACCCTAACACAGAAGCTGTTTTAGGATTAGTTAGATTAAGTAACGATAACCCAGTTGTTACAAACG CTGATGTAACAATTTCTTTGAACAACAACCAATTAACAGTAGCCCCTGTATCAGGTTCTACTAGATACCAAGGTAATGTT GTATATAATTTAGCTCCACAATTACCTAATGTTTTGAAACCAGCAGCTACAACACAAATTGAGTTAGCAGAAAATGAAAG AACTAATCTTCAAAGCCAATCAGTTTTAGATAAAATTAAAAAAGCCACTGATAGCCAAGTTCAATTAGAGGATGTTAAAA TTACTTTGATTGACAACAATAAAAAATTACAAGTAAAAGCTTTAGCAACATCTAGTTACCAAGGCGAAGTTATATATAAC TTACAACAAACCCAAGCATCAGAATTATCCAATGTTTTAGAACCATCAACAGTACCACGAAAAGTAACTTTACCTTCATT AGAAAATCTTGATACAGAAGCAAACAAAAAAGCTGTTTTAGAACAAATTGCAAAAGACCAAACACTTACATTAAATGATG TAACAATTACTTTTGACAACGATAAGAAAACAGTAACAGTAGCAACTAAAGAAGAGACTAAGAATTTTAAAGGCCAAGTT GTTTACGGAATACAACAAGCTCCACCAAGTAGTATATTGACTCCACCAACCAAAACATACTTCTGGTCATGGACTTTATT AATAGTTTTAGTTGTCGCTTTAATTAGTGGTAGTGGATATTATTACACTCAAGGCAAAAAAAATCCTAATCCAAAATCAA CAAAAAGATAA
Upstream 100 bases:
>100_bases ATTCATTAAATAATTACTATAGAAAGGGGTATCAACTAAGAATATAATTTTAATCTTTAGAAAAAAATATTAAAAAAAAC GAAAAGGAAAACATATAATA
Downstream 100 bases:
>100_bases TTAAAAAATTAATTAATATAAAAAAAGAAACTTTTGAAAGTTTCTTTTTTTCTTTTTATAACGATTCTTTTTTCTAAAAA ATTAACTTCCAAAACTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 936; Mature: 936
Protein sequence:
>936_residues MNLSKRPFFKKINLYLLSLFMLLSVGMSVFAEGLTQLPNFLKPAATTQITLTEAQITKPQDQDVLNLFVAEGKTVAINDV TISLNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPDSIQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTIS LNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNN NQLTVAPVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQL TVAPVSGSTRYQGSVIYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVA PVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVS GSTRYQGSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGST RYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQ GSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGNV VYNLAPQLPNVLKPAATTQIELAENERTNLQSQSVLDKIKKATDSQVQLEDVKITLIDNNKKLQVKALATSSYQGEVIYN LQQTQASELSNVLEPSTVPRKVTLPSLENLDTEANKKAVLEQIAKDQTLTLNDVTITFDNDKKTVTVATKEETKNFKGQV VYGIQQAPPSSILTPPTKTYFWSWTLLIVLVVALISGSGYYYTQGKKNPNPKSTKR
Sequences:
>Translated_936_residues MNLSKRPFFKKINLYLLSLFMLLSVGMSVFAEGLTQLPNFLKPAATTQITLTEAQITKPQDQDVLNLFVAEGKTVAINDV TISLNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPDSIQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTIS LNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNN NQLTVAPVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQL TVAPVSGSTRYQGSVIYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVA PVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVS GSTRYQGSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGST RYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQ GSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGNV VYNLAPQLPNVLKPAATTQIELAENERTNLQSQSVLDKIKKATDSQVQLEDVKITLIDNNKKLQVKALATSSYQGEVIYN LQQTQASELSNVLEPSTVPRKVTLPSLENLDTEANKKAVLEQIAKDQTLTLNDVTITFDNDKKTVTVATKEETKNFKGQV VYGIQQAPPSSILTPPTKTYFWSWTLLIVLVVALISGSGYYYTQGKKNPNPKSTKR >Mature_936_residues MNLSKRPFFKKINLYLLSLFMLLSVGMSVFAEGLTQLPNFLKPAATTQITLTEAQITKPQDQDVLNLFVAEGKTVAINDV TISLNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPDSIQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTIS LNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNN NQLTVAPVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQL TVAPVSGSTRYQGSVIYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVA PVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVS GSTRYQGSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGST RYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQ GSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGNV VYNLAPQLPNVLKPAATTQIELAENERTNLQSQSVLDKIKKATDSQVQLEDVKITLIDNNKKLQVKALATSSYQGEVIYN LQQTQASELSNVLEPSTVPRKVTLPSLENLDTEANKKAVLEQIAKDQTLTLNDVTITFDNDKKTVTVATKEETKNFKGQV VYGIQQAPPSSILTPPTKTYFWSWTLLIVLVVALISGSGYYYTQGKKNPNPKSTKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101402; Mature: 101402
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSKRPFFKKINLYLLSLFMLLSVGMSVFAEGLTQLPNFLKPAATTQITLTEAQITKPQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC DQDVLNLFVAEGKTVAINDVTISLNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPD CCCEEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCEECCEEEEEECHHHHHHHCCCC SIQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGS CCCCCCCCCCCCCCCHHHEEEEEEECCCCCEEECCEEEEEECCCEEEEEECCCCCEECCE VVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNN EEEEECHHHHHHHCCCCCCCCCCCHHCCCCCCHHHEEEEEEECCCCCEEECCEEEEEECC NQLTVAPVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLS CEEEEEECCCCCEECCEEEEEECHHHHHHHCCCCCCCCCCCHHCCCCCCHHHEEEEEEEC NDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGSVIYNLAPQQLDTVLNPDSTQPNLTPE CCCCEEECCEEEEEECCCEEEEEECCCCCEECCEEEEEECHHHHHHHCCCCCCCCCCCHH QRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGNVVYNLAPQQ CCCCCCHHHEEEEEEECCCCCEEECCEEEEEECCCEEEEEECCCCCEECCEEEEEECHHH LDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVS HHHHCCCCCCCCCCCHHCCCCCCHHHEEEEEEECCCCCEEECCEEEEEECCCEEEEEECC GSTRYQGSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNA CCCEECCEEEEEECHHHHHHHCCCCCCCCCCCHHCCCCCCHHHEEEEEEECCCCCEEECC DVTISLNNNQLTVAPVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEA EEEEEECCCEEEEEECCCCCEECCEEEEEECHHHHHHHCCCCCCCCCCCHHCCCCCCHHH VLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPDS EEEEEEECCCCCEEECCEEEEEECCCEEEEEECCCCCEECCEEEEEECHHHHHHHCCCCC TQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGNV CCCCCCHHCCCCCCHHHEEEEEEECCCCCEEECCEEEEEECCCEEEEEECCCCCEECCEE VYNLAPQLPNVLKPAATTQIELAENERTNLQSQSVLDKIKKATDSQVQLEDVKITLIDNN EEEECCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECC KKLQVKALATSSYQGEVIYNLQQTQASELSNVLEPSTVPRKVTLPSLENLDTEANKKAVL CEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHH EQIAKDQTLTLNDVTITFDNDKKTVTVATKEETKNFKGQVVYGIQQAPPSSILTPPTKTY HHHHCCCEEEEEEEEEEECCCCEEEEEEEHHHCCCCCCEEEEEEECCCCCCCCCCCCCEE FWSWTLLIVLVVALISGSGYYYTQGKKNPNPKSTKR EHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MNLSKRPFFKKINLYLLSLFMLLSVGMSVFAEGLTQLPNFLKPAATTQITLTEAQITKPQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC DQDVLNLFVAEGKTVAINDVTISLNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPD CCCEEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCEECCEEEEEECHHHHHHHCCCC SIQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGS CCCCCCCCCCCCCCCHHHEEEEEEECCCCCEEECCEEEEEECCCEEEEEECCCCCEECCE VVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNN EEEEECHHHHHHHCCCCCCCCCCCHHCCCCCCHHHEEEEEEECCCCCEEECCEEEEEECC NQLTVAPVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLS CEEEEEECCCCCEECCEEEEEECHHHHHHHCCCCCCCCCCCHHCCCCCCHHHEEEEEEEC NDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGSVIYNLAPQQLDTVLNPDSTQPNLTPE CCCCEEECCEEEEEECCCEEEEEECCCCCEECCEEEEEECHHHHHHHCCCCCCCCCCCHH QRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGNVVYNLAPQQ CCCCCCHHHEEEEEEECCCCCEEECCEEEEEECCCEEEEEECCCCCEECCEEEEEECHHH LDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVS HHHHCCCCCCCCCCCHHCCCCCCHHHEEEEEEECCCCCEEECCEEEEEECCCEEEEEECC GSTRYQGSVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNA CCCEECCEEEEEECHHHHHHHCCCCCCCCCCCHHCCCCCCHHHEEEEEEECCCCCEEECC DVTISLNNNQLTVAPVSGSTRYQGNVVYNLAPQQLDTVLNPDSTQPNLTPEQRNNPNTEA EEEEEECCCEEEEEECCCCCEECCEEEEEECHHHHHHHCCCCCCCCCCCHHCCCCCCHHH VLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGSVVYNLAPQQLDTVLNPDS EEEEEEECCCCCEEECCEEEEEECCCEEEEEECCCCCEECCEEEEEECHHHHHHHCCCCC TQPNLTPEQRNNPNTEAVLGLVRLSNDNPVVTNADVTISLNNNQLTVAPVSGSTRYQGNV CCCCCCHHCCCCCCHHHEEEEEEECCCCCEEECCEEEEEECCCEEEEEECCCCCEECCEE VYNLAPQLPNVLKPAATTQIELAENERTNLQSQSVLDKIKKATDSQVQLEDVKITLIDNN EEEECCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECC KKLQVKALATSSYQGEVIYNLQQTQASELSNVLEPSTVPRKVTLPSLENLDTEANKKAVL CEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHH EQIAKDQTLTLNDVTITFDNDKKTVTVATKEETKNFKGQVVYGIQQAPPSSILTPPTKTY HHHHCCCEEEEEEEEEEECCCCEEEEEEEHHHCCCCCCEEEEEEECCCCCCCCCCCCCEE FWSWTLLIVLVVALISGSGYYYTQGKKNPNPKSTKR EHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA