Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294827

Identifier: 197294827

GI number: 197294827

Start: 832632

End: 833429

Strand: Reverse

Name: 197294827

Synonym: PAa_0813

Alternate gene names: NA

Gene position: 833429-832632 (Counterclockwise)

Preceding gene: 197294828

Following gene: 197294826

Centisome position: 94.71

GC content: 27.19

Gene sequence:

>798_bases
ATGAAATCAAACAACAACACTAAAGTTAACGATTTATTTAAAAAAATTAATGATAATTTCCTTTCTTCTTCTGATACAAC
CGATTACAAACGCAAAGCTTCACGCAAAGGTGTCGCTTTTAAAACAATTTTACTTTTATTAATCACCGCTTTTACTGCAG
GAACTTTTTTTAGTCTTTTTAAAATGACTCAATTAAAGTTTCCTTACTTATGGATGATAAAAGTAATTTTTCTAACTTCA
TCTTTTGCAACTAGCATATTTTATATCGCTGCAATGCTACGTGTAGAAATGTCGCGTCTGTGTTCTTGTCTTTTTGCTGT
TCTAGAAGGATTGACAATAGGAATTTTTTTCCATTTCATTAATTGCATATATTCTAATTTATTAGAAATAGTTTTTATCG
CACTTTTCTCAACTTTGATTATTTTTTGTGTAATGGCTCATGCTTATTATAAAGGTACTTTAAAAGTTACTCAAAGATTT
ACAACAATTATGCAAATAATTTCAATCGCTTTATTTTTCACTTATTTAATTCGTCTGTTTTTTGTTCTTTTTGGAGTGGG
CACAATTGAAAATATTTTATATTACAGTATTTTGGCCATTCCTTTAAGTTTATTTATGTTAGGTTTTTTATCAATGTATT
TAGCTATTCATTTTGATTATACTGAACAAATGATTCAACAAGGATTACCAGAAAAATATGAATGGCAAGTATCATTAGCT
TTTGCCGCTACTTTAATTAGCATTTTTTTAAGAATTGTAAACCTTCTTTTAAGAATCATGGGAAAAGAAAAAGAATAA

Upstream 100 bases:

>100_bases
ACGCTCGGCAAACAACCGAAACACAAAAAAACCAAAAAAAATAATATATAAGTACACTTTAAAAAGTATAAAATTAAATT
TATTATAGAGGTAACTTAAA

Downstream 100 bases:

>100_bases
GACCGCTATTTTTAGCGGTCTTTTCTTGTAAAACCCCATTTCCTGGTGCACAGCATCACAAACATGCCAACAATTTCAGA
TAATAAATCAGAAAGGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITAFTAGTFFSLFKMTQLKFPYLWMIKVIFLTS
SFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFINCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRF
TTIMQIISIALFFTYLIRLFFVLFGVGTIENILYYSILAIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA
FAATLISIFLRIVNLLLRIMGKEKE

Sequences:

>Translated_265_residues
MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITAFTAGTFFSLFKMTQLKFPYLWMIKVIFLTS
SFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFINCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRF
TTIMQIISIALFFTYLIRLFFVLFGVGTIENILYYSILAIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA
FAATLISIFLRIVNLLLRIMGKEKE
>Mature_265_residues
MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITAFTAGTFFSLFKMTQLKFPYLWMIKVIFLTS
SFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFINCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRF
TTIMQIISIALFFTYLIRLFFVLFGVGTIENILYYSILAIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA
FAATLISIFLRIVNLLLRIMGKEKE

Specific function: Unknown

COG id: COG4760

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30591; Mature: 30591

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITAFTAGTFFSLF
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KMTQLKFPYLWMIKVIFLTSSFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRFTTIMQIISIALFFTYLIRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLFGVGTIENILYYSILAIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FAATLISIFLRIVNLLLRIMGKEKE
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA