| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294812
Identifier: 197294812
GI number: 197294812
Start: 818026
End: 819117
Strand: Reverse
Name: 197294812
Synonym: PAa_0797
Alternate gene names: NA
Gene position: 819117-818026 (Counterclockwise)
Preceding gene: 197294813
Following gene: 197294811
Centisome position: 93.09
GC content: 28.57
Gene sequence:
>1092_bases ATGGAGTTATTTAAAGTATTAGTTATTATAGGTATTTTAGGAGTTTTTTTTGGATTGGGTCCTTTATTGATTTGGGTTGT TCAAAAACACGTAAATAATAAATTAAATAATGTAGAAAATATTAAATTACAAATTGAAATTGAGACAATAACTAAACAAG AAAAATTAAACCAAAAAATAGCTGAGTTAGTAAATAATAAAGCTTTATCAGTTCAAGAAAAAACTGAATTACAAGAAGAA ATAAATACTATTCAAACTGAATTAAACCAAAAACAAGCAGAATTATCACAAAATCAAATGTTGACAGGAAAATTAAAAGC TAAAAAATATACAAAAAGAAATCCAATAAAAGCTATAATTATATATTATATTATCATGCTTTGTATAATTGCTATTTTTG GTGGTTTTATATTTTTAGACAATAAATACGATATAACAAATTCAAAACCCAAAACTTATACTATTTCTGAACCGAAAGTA GAAATTGAATCTGAATGGTTTGAAGGATACCGTTCTAGAGATGATAACTACCAAATTAAGAAATATTATAAAGCAGATGG TTATGACCCCAATGCAGAATTTGGGGCCACAAAAGATTGGAAAGGTAGTCCTTGTCAAAGTTATAGTCATGATGTTAATC ACCTTGTTTTGGGCCACCAAATGATTAAAGTTAAATACACTTTCTACGGTCTCAATGGCCTTGGTCGCGGACATCACCGT GAATATGAGCCAAATGATATAATGCCGTTTATGAAAAACCCTTTTGAAAAATGGGAAGTAAAAGATAGCAGGATTGATTT TTTTAGAACTTTCCATACAAGAAATAAAGATGATGATTCACAATTTGATGATATGTTTATCAATGACCCTTCAAACCACT ACACAGAACTCGAATACGAAGGCCCGAAATGGTTAATTGAAGAAGATAAAGACTTCTTCATGGATGAAGTTCGTTGTCAT ATCATAGACCCCAAATATTCTACATATCCCAAAGATGAAATGAAAAATTACTACCTTCACTTCAACCCAAAACAAAGATA TATCACGCTTTACACTAAGAAATTTAATACAAAAAATAATGAAAATAATTAA
Upstream 100 bases:
>100_bases AACATGGTTTGGTCGGTAATGCAATTTTTTTGCATTACCAGATTAGATTATGATACAATGATGATAAGTTATAAAAATAA AAAAGGAAGTTAATTATAGG
Downstream 100 bases:
>100_bases AAAAAGGAGTTTAGTAATTAATGTTTAAATTAAAAAATCAATTAAAAAAATAATTAATATTTTAAAACAACAATAAAATC TTTTAAAAAGTTTTATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKIAELVNNKALSVQEKTELQEE INTIQTELNQKQAELSQNQMLTGKLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGHHR EYEPNDIMPFMKNPFEKWEVKDSRIDFFRTFHTRNKDDDSQFDDMFINDPSNHYTELEYEGPKWLIEEDKDFFMDEVRCH IIDPKYSTYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNNENN
Sequences:
>Translated_363_residues MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKIAELVNNKALSVQEKTELQEE INTIQTELNQKQAELSQNQMLTGKLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGHHR EYEPNDIMPFMKNPFEKWEVKDSRIDFFRTFHTRNKDDDSQFDDMFINDPSNHYTELEYEGPKWLIEEDKDFFMDEVRCH IIDPKYSTYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNNENN >Mature_363_residues MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKIAELVNNKALSVQEKTELQEE INTIQTELNQKQAELSQNQMLTGKLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGHHR EYEPNDIMPFMKNPFEKWEVKDSRIDFFRTFHTRNKDDDSQFDDMFINDPSNHYTELEYEGPKWLIEEDKDFFMDEVRCH IIDPKYSTYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNNENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43098; Mature: 43098
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHH AELVNNKALSVQEKTELQEEINTIQTELNQKQAELSQNQMLTGKLKAKKYTKRNPIKAII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHCCCCCHHHHH IYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKVEIESEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEEHHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGHHR EEEECCCCCCCCCCCCCCCCCCCCCCCHHCCHHHEEECEEEEEEEEEEEECCCCCCCCCC EYEPNDIMPFMKNPFEKWEVKDSRIDFFRTFHTRNKDDDSQFDDMFINDPSNHYTELEYE CCCCCCCCHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEEC GPKWLIEEDKDFFMDEVRCHIIDPKYSTYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNN CCEEEECCCHHHHHHCCEEEEECCCCCCCCHHHHCCEEEEECCCCCEEEEEEEECCCCCC ENN CCC >Mature Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHH AELVNNKALSVQEKTELQEEINTIQTELNQKQAELSQNQMLTGKLKAKKYTKRNPIKAII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHCCCCCHHHHH IYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKVEIESEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEEHHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGHHR EEEECCCCCCCCCCCCCCCCCCCCCCCHHCCHHHEEECEEEEEEEEEEEECCCCCCCCCC EYEPNDIMPFMKNPFEKWEVKDSRIDFFRTFHTRNKDDDSQFDDMFINDPSNHYTELEYE CCCCCCCCHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEEC GPKWLIEEDKDFFMDEVRCHIIDPKYSTYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNN CCEEEECCCHHHHHHCCEEEEECCCCCCCCHHHHCCEEEEECCCCCEEEEEEEECCCCCC ENN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA