| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294758
Identifier: 197294758
GI number: 197294758
Start: 743892
End: 745298
Strand: Direct
Name: 197294758
Synonym: PAa_0728
Alternate gene names: NA
Gene position: 743892-745298 (Clockwise)
Preceding gene: 197294757
Following gene: 197294759
Centisome position: 84.54
GC content: 32.55
Gene sequence:
>1407_bases ATGTTATTAATTATTATCTTCAATTTTGTCCCTTCCATCAATGCTCATTCTTCTTTTTTTCATAATCAAAACAAAACCAA AATTAAATTAGCAGATTACGAAACCCTCCAACAAGAATGGTTAGCGACCCAATCCAAAATGAAAAGATATGACATTCCTG TTTTATCCAAAGAAAGTATCCCTGAAATCTTAAAATATTTCAACATTAAAACTTCTACTTATGGGTTGGATAAGTCGACT TACAATCCTTATGCCAAAAATATCTTCTACTGGGAACTCAAAAATCCTCCTGCAGGATTAATCTGTGCTTTTTTCAAAGC CAGGCAAAACCCTTTTAAAATTAAATATCCTCAAGATGACTATGAATACACCTTAGATGACCTTTTAAAATACGAAATCG CCATCGAAGAAGCTTTCGTATTTTGGGATGTTCAACAAAAAAATCAGGAAGAAAAGGGCAATGTGGAATTAATCATCATC AATCTCTTTGTTGACCAAAGTAAAGAAAAAGCGATAAATGATTACTTAATCCAAAATAAAATCATCAAGGAACCCAAACT AATTAAATTAGGTTGTTATAATATTACCCCTACCACAGGTTTAATCACTCCTTTACCTGCAGGAGGATTTAATGGTATTG AAATTGCTGCTATTTATTTCGATAATGGCGTTCGTCTCCTACCTGAAGATAAAAAAACTAGAGATTTAAAACAGGAAATA GAATGGCGAGAAGAAATTAAAGAACTTTACCAAGAAATCATCAAACGGCAAACTTACACCATTGAAGATTTATTGAAACT CTCCAATGGCGCCAAAAACATCTATCTTTTTTCTTTCGTTACTAAAAAAAGCCCACAAACCATACAACTACCTGATTCTG CTGACCCTTACCAAGCTATTCGTGACTGGAAACGAGAAAACAACCTTTACACTTTTCCTCCTCTAGTTCAAGAAGATGAC TATGAAGAACAAAGCGAAAATCGTGATGCTGGTTTTGAAATTAATTCTCCTGCTTATAAAAAAATTTCTATTCTTTTCCC GATTAAAATAGTCAAACATACTTTTGAAACTACTGATTGTTGTTATTTTGTAGTTTGTAAAAATGATACACTCCAAATTA AACTCGCCAAACAATATCGTGATGCTTATGTAAATTGGTTAAACCAATGTGAAATTAAACCTGGCATTTCTTATTCAGCT GGAGAAATAAGAGATAAATTTGGTCGTTCATCAAGAGACATTTATAATGAAGAAGGGAGAAAATGTAGGTATTATTATGT TACAAATACTTTCATAGATGATTGGTACGTCAATGGGAGTGAATGTTCTGGCTCAAACAATACTTTTTCTAATTTTTATG ACACCACCCCGCCACCCAAAAAACCTCCAGAATTAAATATTAATTGA
Upstream 100 bases:
>100_bases TTTTTTACTAGGGGTCTTTTTTTATACCCAAATCACAAAAAGGAGGTTTTCAAAATGTCTAAAATAACCCAAATCCCCTT TATCTAAAAAATTAATAATT
Downstream 100 bases:
>100_bases TATTAAGACCTTCTAATGAAGGTCTTTTTTTATTTTTGCTCATTTTTGTTAAAATCAAAAAAAAGAATTTGTGTTCTAAT AAAGAAGAAGTCAAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MLLIIIFNFVPSINAHSSFFHNQNKTKIKLADYETLQQEWLATQSKMKRYDIPVLSKESIPEILKYFNIKTSTYGLDKST YNPYAKNIFYWELKNPPAGLICAFFKARQNPFKIKYPQDDYEYTLDDLLKYEIAIEEAFVFWDVQQKNQEEKGNVELIII NLFVDQSKEKAINDYLIQNKIIKEPKLIKLGCYNITPTTGLITPLPAGGFNGIEIAAIYFDNGVRLLPEDKKTRDLKQEI EWREEIKELYQEIIKRQTYTIEDLLKLSNGAKNIYLFSFVTKKSPQTIQLPDSADPYQAIRDWKRENNLYTFPPLVQEDD YEEQSENRDAGFEINSPAYKKISILFPIKIVKHTFETTDCCYFVVCKNDTLQIKLAKQYRDAYVNWLNQCEIKPGISYSA GEIRDKFGRSSRDIYNEEGRKCRYYYVTNTFIDDWYVNGSECSGSNNTFSNFYDTTPPPKKPPELNIN
Sequences:
>Translated_468_residues MLLIIIFNFVPSINAHSSFFHNQNKTKIKLADYETLQQEWLATQSKMKRYDIPVLSKESIPEILKYFNIKTSTYGLDKST YNPYAKNIFYWELKNPPAGLICAFFKARQNPFKIKYPQDDYEYTLDDLLKYEIAIEEAFVFWDVQQKNQEEKGNVELIII NLFVDQSKEKAINDYLIQNKIIKEPKLIKLGCYNITPTTGLITPLPAGGFNGIEIAAIYFDNGVRLLPEDKKTRDLKQEI EWREEIKELYQEIIKRQTYTIEDLLKLSNGAKNIYLFSFVTKKSPQTIQLPDSADPYQAIRDWKRENNLYTFPPLVQEDD YEEQSENRDAGFEINSPAYKKISILFPIKIVKHTFETTDCCYFVVCKNDTLQIKLAKQYRDAYVNWLNQCEIKPGISYSA GEIRDKFGRSSRDIYNEEGRKCRYYYVTNTFIDDWYVNGSECSGSNNTFSNFYDTTPPPKKPPELNIN >Mature_468_residues MLLIIIFNFVPSINAHSSFFHNQNKTKIKLADYETLQQEWLATQSKMKRYDIPVLSKESIPEILKYFNIKTSTYGLDKST YNPYAKNIFYWELKNPPAGLICAFFKARQNPFKIKYPQDDYEYTLDDLLKYEIAIEEAFVFWDVQQKNQEEKGNVELIII NLFVDQSKEKAINDYLIQNKIIKEPKLIKLGCYNITPTTGLITPLPAGGFNGIEIAAIYFDNGVRLLPEDKKTRDLKQEI EWREEIKELYQEIIKRQTYTIEDLLKLSNGAKNIYLFSFVTKKSPQTIQLPDSADPYQAIRDWKRENNLYTFPPLVQEDD YEEQSENRDAGFEINSPAYKKISILFPIKIVKHTFETTDCCYFVVCKNDTLQIKLAKQYRDAYVNWLNQCEIKPGISYSA GEIRDKFGRSSRDIYNEEGRKCRYYYVTNTFIDDWYVNGSECSGSNNTFSNFYDTTPPPKKPPELNIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54824; Mature: 54824
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIIIFNFVPSINAHSSFFHNQNKTKIKLADYETLQQEWLATQSKMKRYDIPVLSKESI CEEEEEEECCCCCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHH PEILKYFNIKTSTYGLDKSTYNPYAKNIFYWELKNPPAGLICAFFKARQNPFKIKYPQDD HHHHHHHCCCCCEECCCCCCCCCHHCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCC YEYTLDDLLKYEIAIEEAFVFWDVQQKNQEEKGNVELIIINLFVDQSKEKAINDYLIQNK HHCCHHHHHHHHHEEEEEEEEEEEHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHH IIKEPKLIKLGCYNITPTTGLITPLPAGGFNGIEIAAIYFDNGVRLLPEDKKTRDLKQEI HCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCHHHHHHHHH EWREEIKELYQEIIKRQTYTIEDLLKLSNGAKNIYLFSFVTKKSPQTIQLPDSADPYQAI HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEECCCCCCHHHHH RDWKRENNLYTFPPLVQEDDYEEQSENRDAGFEINSPAYKKISILFPIKIVKHTFETTDC HHHHHCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCEEEEEEEEHHHHHHHCCCCCE CYFVVCKNDTLQIKLAKQYRDAYVNWLNQCEIKPGISYSAGEIRDKFGRSSRDIYNEEGR EEEEEECCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCC KCRYYYVTNTFIDDWYVNGSECSGSNNTFSNFYDTTPPPKKPPELNIN EEEEEEEEECEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLIIIFNFVPSINAHSSFFHNQNKTKIKLADYETLQQEWLATQSKMKRYDIPVLSKESI CEEEEEEECCCCCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHH PEILKYFNIKTSTYGLDKSTYNPYAKNIFYWELKNPPAGLICAFFKARQNPFKIKYPQDD HHHHHHHCCCCCEECCCCCCCCCHHCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCC YEYTLDDLLKYEIAIEEAFVFWDVQQKNQEEKGNVELIIINLFVDQSKEKAINDYLIQNK HHCCHHHHHHHHHEEEEEEEEEEEHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHH IIKEPKLIKLGCYNITPTTGLITPLPAGGFNGIEIAAIYFDNGVRLLPEDKKTRDLKQEI HCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCHHHHHHHHH EWREEIKELYQEIIKRQTYTIEDLLKLSNGAKNIYLFSFVTKKSPQTIQLPDSADPYQAI HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEECCCCCCHHHHH RDWKRENNLYTFPPLVQEDDYEEQSENRDAGFEINSPAYKKISILFPIKIVKHTFETTDC HHHHHCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCEEEEEEEEHHHHHHHCCCCCE CYFVVCKNDTLQIKLAKQYRDAYVNWLNQCEIKPGISYSAGEIRDKFGRSSRDIYNEEGR EEEEEECCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCC KCRYYYVTNTFIDDWYVNGSECSGSNNTFSNFYDTTPPPKKPPELNIN EEEEEEEEECEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA