| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294751
Identifier: 197294751
GI number: 197294751
Start: 733623
End: 734030
Strand: Reverse
Name: 197294751
Synonym: PAa_0717
Alternate gene names: NA
Gene position: 734030-733623 (Counterclockwise)
Preceding gene: 197294752
Following gene: 197294749
Centisome position: 83.42
GC content: 26.72
Gene sequence:
>408_bases ATGTTATTTAATTTAATTGACTCAGAAAAAGATTTATTTGAAGATTTATTCGCAGGAATTCAACCAACCAATTTGAACCA TATGATGAAAACAGATATCCAAGAAAAAGATGATAAATATTTAATTACCGTGGAATTGCCGGGTTTCCAAAAAGAAAATA TTAAAGTAGCCTTAGAAAAAGGTTATTTGATTGTTGAAGCTAAAACAAATCAAGAAAATGAAAAAAAAGAACGTAATTTT TTAAGAAAAGAAAGATTACAAGGTATTTTCCGACGTAATTTTTACTTAGGAGAAGGTTTTTCATTAGAAGATATCCAAGG ACGCTTGGAAGAAGGTTTACTAAAGTTAAGTGTTACTAAAAAAGATACAAAAGAAGTTAAAGAAAAACGTTATTTAGAAC TAAAATAA
Upstream 100 bases:
>100_bases AGCACTCAAGGGTTGACAGTGCTATTTTTTTTTGTTAAAATACAATTGAACTTAAAAAATAATTTAAGTTTGATAAAAAT ACTTTGAAGAGGTGATAAAA
Downstream 100 bases:
>100_bases AAAGACCCTTTGAGAGGGTCTTATTTTTTTATTTGTTAAAAAAAGTCATTGTACAAAAAGATATTTTTAAAAAAAGATAA ATGTTAAAAATTGCTTTCTT
Product: Hsp20-family chaperone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MLFNLIDSEKDLFEDLFAGIQPTNLNHMMKTDIQEKDDKYLITVELPGFQKENIKVALEKGYLIVEAKTNQENEKKERNF LRKERLQGIFRRNFYLGEGFSLEDIQGRLEEGLLKLSVTKKDTKEVKEKRYLELK
Sequences:
>Translated_135_residues MLFNLIDSEKDLFEDLFAGIQPTNLNHMMKTDIQEKDDKYLITVELPGFQKENIKVALEKGYLIVEAKTNQENEKKERNF LRKERLQGIFRRNFYLGEGFSLEDIQGRLEEGLLKLSVTKKDTKEVKEKRYLELK >Mature_135_residues MLFNLIDSEKDLFEDLFAGIQPTNLNHMMKTDIQEKDDKYLITVELPGFQKENIKVALEKGYLIVEAKTNQENEKKERNF LRKERLQGIFRRNFYLGEGFSLEDIQGRLEEGLLKLSVTKKDTKEVKEKRYLELK
Specific function: Probable chaperone [H]
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small heat shock protein (HSP20) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002068 - InterPro: IPR008978 [H]
Pfam domain/function: PF00011 HSP20 [H]
EC number: NA
Molecular weight: Translated: 15989; Mature: 15989
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFNLIDSEKDLFEDLFAGIQPTNLNHMMKTDIQEKDDKYLITVELPGFQKENIKVALEK CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEC GYLIVEAKTNQENEKKERNFLRKERLQGIFRRNFYLGEGFSLEDIQGRLEEGLLKLSVTK CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECC KDTKEVKEKRYLELK HHHHHHHHHHCCCCC >Mature Secondary Structure MLFNLIDSEKDLFEDLFAGIQPTNLNHMMKTDIQEKDDKYLITVELPGFQKENIKVALEK CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEC GYLIVEAKTNQENEKKERNFLRKERLQGIFRRNFYLGEGFSLEDIQGRLEEGLLKLSVTK CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECC KDTKEVKEKRYLELK HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA