Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294663

Identifier: 197294663

GI number: 197294663

Start: 615205

End: 615798

Strand: Reverse

Name: 197294663

Synonym: PAa_0619

Alternate gene names: NA

Gene position: 615798-615205 (Counterclockwise)

Preceding gene: 197294664

Following gene: 197294662

Centisome position: 69.98

GC content: 30.3

Gene sequence:

>594_bases
ATGAAAAACATTGAATTAGAACAAAATACCTTAGCGTGGCACGAACATCGCCGAAAATATATTAACGCCTCAGAAGTGGC
AACCATTATGGGTCTCAACCCCTTTGAAACAAAAGAACAATTACTGAAAAGAAAACTTTTTAATCTTAAAATAGAAGATA
ATCCCGCTATGCAAAGAGGTCGTCTTTTAGAACCTAAAGCACGCTTGTTTTTTAATCAACAAAACCAATTTAATTTTAAT
CCCAAAGTTTTTGTTAAAGATTTCATGTCAGCTTCTTTAGATGGTTGGGATGATAAAACCCAAAATTTATTAGAAATTAA
ATGTCCCTTTTCTTTAAAAAATTTCACTTGGAGAGCTTTTTTCCAAGAAGATAAAGTTCCTCTTTTTTATTATGCTCAAA
TTCAGGCTCAAATATATTGTTCTGAAGCTTGCAAAGCTTATTTTTTTGTTTACCAAAGTGATGATTGCAACAAAGTTAAA
GAAATTCAAGAAGATGATGCCTTTATTAAAGATCTTGTTAATCAATGTCGTTTGTTTTTTCAAATGTTTCAAAAAAGCAA
ACAACTCCAAGAAAAACTCCAAATTGCAATTTAA

Upstream 100 bases:

>100_bases
ATTATTTTTTAGTTTTAAAGAATATTTTTAAAACAAAAAAATGTCTAAAAAACATCATCTCCCCATATCCATAGAACAAA
ATTAAATTTGAAAGATAATT

Downstream 100 bases:

>100_bases
TCACAATTTAATTTTTGTGGTTTTTTCGGACTGCAATAAAAATAATGATTTTTTCTTTTAAAATATAGTTGACAAAAAAA
ACAAAAAAAGATATAATATA

Product: Similar to phage-related protein predicted endonuclease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRGRLLEPKARLFFNQQNQFNFN
PKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAFFQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVK
EIQEDDAFIKDLVNQCRLFFQMFQKSKQLQEKLQIAI

Sequences:

>Translated_197_residues
MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRGRLLEPKARLFFNQQNQFNFN
PKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAFFQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVK
EIQEDDAFIKDLVNQCRLFFQMFQKSKQLQEKLQIAI
>Mature_197_residues
MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRGRLLEPKARLFFNQQNQFNFN
PKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAFFQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVK
EIQEDDAFIKDLVNQCRLFFQMFQKSKQLQEKLQIAI

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23598; Mature: 23598

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRG
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCEECCCCHHHCC
RLLEPKARLFFNQQNQFNFNPKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAF
CCCCCHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEE
FQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVKEIQEDDAFIKDLVNQCRLFF
ECCCCCCEEEEEEEHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
QMFQKSKQLQEKLQIAI
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRG
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCEECCCCHHHCC
RLLEPKARLFFNQQNQFNFNPKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAF
CCCCCHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEE
FQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVKEIQEDDAFIKDLVNQCRLFF
ECCCCCCEEEEEEEHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
QMFQKSKQLQEKLQIAI
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA