| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294663
Identifier: 197294663
GI number: 197294663
Start: 615205
End: 615798
Strand: Reverse
Name: 197294663
Synonym: PAa_0619
Alternate gene names: NA
Gene position: 615798-615205 (Counterclockwise)
Preceding gene: 197294664
Following gene: 197294662
Centisome position: 69.98
GC content: 30.3
Gene sequence:
>594_bases ATGAAAAACATTGAATTAGAACAAAATACCTTAGCGTGGCACGAACATCGCCGAAAATATATTAACGCCTCAGAAGTGGC AACCATTATGGGTCTCAACCCCTTTGAAACAAAAGAACAATTACTGAAAAGAAAACTTTTTAATCTTAAAATAGAAGATA ATCCCGCTATGCAAAGAGGTCGTCTTTTAGAACCTAAAGCACGCTTGTTTTTTAATCAACAAAACCAATTTAATTTTAAT CCCAAAGTTTTTGTTAAAGATTTCATGTCAGCTTCTTTAGATGGTTGGGATGATAAAACCCAAAATTTATTAGAAATTAA ATGTCCCTTTTCTTTAAAAAATTTCACTTGGAGAGCTTTTTTCCAAGAAGATAAAGTTCCTCTTTTTTATTATGCTCAAA TTCAGGCTCAAATATATTGTTCTGAAGCTTGCAAAGCTTATTTTTTTGTTTACCAAAGTGATGATTGCAACAAAGTTAAA GAAATTCAAGAAGATGATGCCTTTATTAAAGATCTTGTTAATCAATGTCGTTTGTTTTTTCAAATGTTTCAAAAAAGCAA ACAACTCCAAGAAAAACTCCAAATTGCAATTTAA
Upstream 100 bases:
>100_bases ATTATTTTTTAGTTTTAAAGAATATTTTTAAAACAAAAAAATGTCTAAAAAACATCATCTCCCCATATCCATAGAACAAA ATTAAATTTGAAAGATAATT
Downstream 100 bases:
>100_bases TCACAATTTAATTTTTGTGGTTTTTTCGGACTGCAATAAAAATAATGATTTTTTCTTTTAAAATATAGTTGACAAAAAAA ACAAAAAAAGATATAATATA
Product: Similar to phage-related protein predicted endonuclease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRGRLLEPKARLFFNQQNQFNFN PKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAFFQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVK EIQEDDAFIKDLVNQCRLFFQMFQKSKQLQEKLQIAI
Sequences:
>Translated_197_residues MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRGRLLEPKARLFFNQQNQFNFN PKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAFFQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVK EIQEDDAFIKDLVNQCRLFFQMFQKSKQLQEKLQIAI >Mature_197_residues MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRGRLLEPKARLFFNQQNQFNFN PKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAFFQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVK EIQEDDAFIKDLVNQCRLFFQMFQKSKQLQEKLQIAI
Specific function: Unknown
COG id: COG5377
COG function: function code L; Phage-related protein, predicted endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23598; Mature: 23598
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRG CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCEECCCCHHHCC RLLEPKARLFFNQQNQFNFNPKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAF CCCCCHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEE FQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVKEIQEDDAFIKDLVNQCRLFF ECCCCCCEEEEEEEHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH QMFQKSKQLQEKLQIAI HHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNIELEQNTLAWHEHRRKYINASEVATIMGLNPFETKEQLLKRKLFNLKIEDNPAMQRG CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCEECCCCHHHCC RLLEPKARLFFNQQNQFNFNPKVFVKDFMSASLDGWDDKTQNLLEIKCPFSLKNFTWRAF CCCCCHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEE FQEDKVPLFYYAQIQAQIYCSEACKAYFFVYQSDDCNKVKEIQEDDAFIKDLVNQCRLFF ECCCCCCEEEEEEEHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH QMFQKSKQLQEKLQIAI HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA