Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294651

Identifier: 197294651

GI number: 197294651

Start: 602159

End: 602449

Strand: Direct

Name: 197294651

Synonym: PAa_0607

Alternate gene names: NA

Gene position: 602159-602449 (Clockwise)

Preceding gene: 197294650

Following gene: 197294652

Centisome position: 68.43

GC content: 22.34

Gene sequence:

>291_bases
ATGAATATTTTAAGAACTTGTATAGTAACTAAGAAAAGTAAAAACCCTCTTCAAATGATTAGAATTAACGTGAATAAATT
AGGTCAAGTAGCAATTGATTATGATCGAAAACTTCAAGGAAGAGGAGTTTATTTAAGTCTCAAATTAGAATATGTTAAAT
TGGTTCAAAAAAAGAAACTTTTAGATAAAAAGCTAAAAACTTTTGTTCCCTTAGAAATTTATCAATCTCTTTTAAAATTT
GTTTTATCAAAAAATAACTTAAAAAAAGAAGCTGATAATTTAAATAATTAA

Upstream 100 bases:

>100_bases
TTGGGTAAAAATGTCAAATTAGCTGCTGAAGTTACCAAATGGAACATTGATATCAAAACCTTATCCCACGCTAAAAAAGA
AGGAATAATATAATTAAGAA

Downstream 100 bases:

>100_bases
ATAATTAATATTTTTCATGTAAATAAAAAAGGAGGGATTAAATGACCCCTGATAAAAATAAAAATAAACTGGAAGTTGAT
AAAAATAAAGAACAATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNILRTCIVTKKSKNPLQMIRINVNKLGQVAIDYDRKLQGRGVYLSLKLEYVKLVQKKKLLDKKLKTFVPLEIYQSLLKF
VLSKNNLKKEADNLNN

Sequences:

>Translated_96_residues
MNILRTCIVTKKSKNPLQMIRINVNKLGQVAIDYDRKLQGRGVYLSLKLEYVKLVQKKKLLDKKLKTFVPLEIYQSLLKF
VLSKNNLKKEADNLNN
>Mature_96_residues
MNILRTCIVTKKSKNPLQMIRINVNKLGQVAIDYDRKLQGRGVYLSLKLEYVKLVQKKKLLDKKLKTFVPLEIYQSLLKF
VLSKNNLKKEADNLNN

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11205; Mature: 11205

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILRTCIVTKKSKNPLQMIRINVNKLGQVAIDYDRKLQGRGVYLSLKLEYVKLVQKKKL
CCHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHH
LDKKLKTFVPLEIYQSLLKFVLSKNNLKKEADNLNN
HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MNILRTCIVTKKSKNPLQMIRINVNKLGQVAIDYDRKLQGRGVYLSLKLEYVKLVQKKKL
CCHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHH
LDKKLKTFVPLEIYQSLLKFVLSKNNLKKEADNLNN
HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA