| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294571
Identifier: 197294571
GI number: 197294571
Start: 523666
End: 524106
Strand: Reverse
Name: 197294571
Synonym: PAa_0527
Alternate gene names: NA
Gene position: 524106-523666 (Counterclockwise)
Preceding gene: 197294572
Following gene: 197294570
Centisome position: 59.56
GC content: 30.16
Gene sequence:
>441_bases TTGTCTGCAGGTAATTTCGTAGCTTCAGGTTTAAATGTGGTTGTAAATAATAGACTTTCTCAATTAACAGCTGATTTGGT ATCAAATAACCTAGTTGTTTTAGAAAATTCCCAAAACATAAGAGAAATCGAATATTTGTTCATGGGTGCTATTGATATTG TAGATGATGTTCCAATAGTTAGAAATGTAGCTAGAAGTGGTTTAGAAGTTTTTAAAACTTTTGGTAAAGCAGTTAATTAT CCAACTAACTTTTTTGAAGGTGTTATAAATGGAGTAAACGACCAAAATTATAAACCTATTGAAATACCTTTGGATCTTTT AAAAAACACTGGCAGATTAACAGAAGGAGCTGTTGTAGGTGTCGCAGAAGCTACTATAAATACTAGCAAAGATATTTGTT ACGGTTTTAAAGATATTTTTAGTAAATTATTTTCATGGTAG
Upstream 100 bases:
>100_bases TATTTCGATTTTGATATTGAAAAACATTTTAAAACAAATTTTGTGAAAGATATTACAAAGAAACTTATAGAAAAAAATAA TTAATAAAGCTGTTAAAACC
Downstream 100 bases:
>100_bases TTAAATTATTGATCCAAAAAATTAAGGAGAAATAATTATGATAAAAAATATTATCAAAAAAACCATCTTTTTTTAATTTT AATTTCAAGTTTCGTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIVRNVARSGLEVFKTFGKAVNY PTNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVGVAEATINTSKDICYGFKDIFSKLFSW
Sequences:
>Translated_146_residues MSAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIVRNVARSGLEVFKTFGKAVNY PTNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVGVAEATINTSKDICYGFKDIFSKLFSW >Mature_145_residues SAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIVRNVARSGLEVFKTFGKAVNYP TNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVGVAEATINTSKDICYGFKDIFSKLFSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16036; Mature: 15905
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHH RNVARSGLEVFKTFGKAVNYPTNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEE VAEATINTSKDICYGFKDIFSKLFSW EHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHH RNVARSGLEVFKTFGKAVNYPTNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEE VAEATINTSKDICYGFKDIFSKLFSW EHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA