Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is 197294571

Identifier: 197294571

GI number: 197294571

Start: 523666

End: 524106

Strand: Reverse

Name: 197294571

Synonym: PAa_0527

Alternate gene names: NA

Gene position: 524106-523666 (Counterclockwise)

Preceding gene: 197294572

Following gene: 197294570

Centisome position: 59.56

GC content: 30.16

Gene sequence:

>441_bases
TTGTCTGCAGGTAATTTCGTAGCTTCAGGTTTAAATGTGGTTGTAAATAATAGACTTTCTCAATTAACAGCTGATTTGGT
ATCAAATAACCTAGTTGTTTTAGAAAATTCCCAAAACATAAGAGAAATCGAATATTTGTTCATGGGTGCTATTGATATTG
TAGATGATGTTCCAATAGTTAGAAATGTAGCTAGAAGTGGTTTAGAAGTTTTTAAAACTTTTGGTAAAGCAGTTAATTAT
CCAACTAACTTTTTTGAAGGTGTTATAAATGGAGTAAACGACCAAAATTATAAACCTATTGAAATACCTTTGGATCTTTT
AAAAAACACTGGCAGATTAACAGAAGGAGCTGTTGTAGGTGTCGCAGAAGCTACTATAAATACTAGCAAAGATATTTGTT
ACGGTTTTAAAGATATTTTTAGTAAATTATTTTCATGGTAG

Upstream 100 bases:

>100_bases
TATTTCGATTTTGATATTGAAAAACATTTTAAAACAAATTTTGTGAAAGATATTACAAAGAAACTTATAGAAAAAAATAA
TTAATAAAGCTGTTAAAACC

Downstream 100 bases:

>100_bases
TTAAATTATTGATCCAAAAAATTAAGGAGAAATAATTATGATAAAAAATATTATCAAAAAAACCATCTTTTTTTAATTTT
AATTTCAAGTTTCGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIVRNVARSGLEVFKTFGKAVNY
PTNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVGVAEATINTSKDICYGFKDIFSKLFSW

Sequences:

>Translated_146_residues
MSAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIVRNVARSGLEVFKTFGKAVNY
PTNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVGVAEATINTSKDICYGFKDIFSKLFSW
>Mature_145_residues
SAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIVRNVARSGLEVFKTFGKAVNYP
TNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVGVAEATINTSKDICYGFKDIFSKLFSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16036; Mature: 15905

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHH
RNVARSGLEVFKTFGKAVNYPTNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEE
VAEATINTSKDICYGFKDIFSKLFSW
EHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAGNFVASGLNVVVNNRLSQLTADLVSNNLVVLENSQNIREIEYLFMGAIDIVDDVPIV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHH
RNVARSGLEVFKTFGKAVNYPTNFFEGVINGVNDQNYKPIEIPLDLLKNTGRLTEGAVVG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEE
VAEATINTSKDICYGFKDIFSKLFSW
EHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA