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The map label for this gene is frr

Identifier: 197294561

GI number: 197294561

Start: 509653

End: 510207

Strand: Reverse

Name: frr

Synonym: PAa_0516

Alternate gene names: 197294561

Gene position: 510207-509653 (Counterclockwise)

Preceding gene: 197294562

Following gene: 197294560

Centisome position: 57.98

GC content: 30.45

Gene sequence:

>555_bases
GTGGAGCAAAAAGCGCAAGAAACAATTTTATTAATTGAAAAAAAAATGTCTCAAGCACAAGAGGTCATGCTCAAGAATTT
TTTAGAAATTCGAACGGGTTATGCTAATCCTAATATTTTAAATAAAGTCAATATTAATTATTATGGTTCCCAAACCCCTT
TGAAAACATTGTCCTCTATTAGTGTTTCCGAAGGAACTCAATTACAAATTAAACCTTATGAAAAAACTTTAATTCCTTCG
ATTAAAAAAGCAATTTTGGCTTCAGATTTAGGGATCACCCCTGAAACTGATGGAGTTTTGTTAAGGCTTAATTTTCCGAA
ACCAACCGAAGAAAGAAGAAAAGTTTTGGTGAAGGAAGTGGATAAATTATCTGAACAGACAAAAGTAGCTGTTAGAAATA
TTCGCCGTGATGCAAACGATAAAATAAAAAAACTGGCACTTACTAAAGATTTAGAAGCTTTATACTTAGAAAAAATTCAA
ATTTTGACTGACAAAAACATGAAAATGATTGAAAAAGAGGCCAACAACAAAAACAAAGAACTTTTAAAATTTTAG

Upstream 100 bases:

>100_bases
TCGATATTTTAGTTTTTAATATGCTAAAACCAGGAAACATAAAAAAAGCTGTTTTACAAAAAGAAATTGGTACTATTATT
AGCTCAAAAGGAGAATAAAG

Downstream 100 bases:

>100_bases
TTTTAGTTTTTGATTGAAAGCGAGGAGTTTTTATAATGAATTCAATAAAAAAGAGAATAATAACGGGAATGAGTTTGGTA
TTATTTTCTTTTTTCTTTTA

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MEQKAQETILLIEKKMSQAQEVMLKNFLEIRTGYANPNILNKVNINYYGSQTPLKTLSSISVSEGTQLQIKPYEKTLIPS
IKKAILASDLGITPETDGVLLRLNFPKPTEERRKVLVKEVDKLSEQTKVAVRNIRRDANDKIKKLALTKDLEALYLEKIQ
ILTDKNMKMIEKEANNKNKELLKF

Sequences:

>Translated_184_residues
MEQKAQETILLIEKKMSQAQEVMLKNFLEIRTGYANPNILNKVNINYYGSQTPLKTLSSISVSEGTQLQIKPYEKTLIPS
IKKAILASDLGITPETDGVLLRLNFPKPTEERRKVLVKEVDKLSEQTKVAVRNIRRDANDKIKKLALTKDLEALYLEKIQ
ILTDKNMKMIEKEANNKNKELLKF
>Mature_184_residues
MEQKAQETILLIEKKMSQAQEVMLKNFLEIRTGYANPNILNKVNINYYGSQTPLKTLSSISVSEGTQLQIKPYEKTLIPS
IKKAILASDLGITPETDGVLLRLNFPKPTEERRKVLVKEVDKLSEQTKVAVRNIRRDANDKIKKLALTKDLEALYLEKIQ
ILTDKNMKMIEKEANNKNKELLKF

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family

Homologues:

Organism=Escherichia coli, GI1786368, Length=176, Percent_Identity=40.3409090909091, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): RRF_PHYAS (B1VA77)

Other databases:

- EMBL:   AM422018
- RefSeq:   YP_001799102.1
- ProteinModelPortal:   B1VA77
- SMR:   B1VA77
- GeneID:   6798866
- GenomeReviews:   AM422018_GR
- HOGENOM:   HBG533975
- OMA:   YYGAETP
- ProtClustDB:   PRK00083
- GO:   GO:0005737
- HAMAP:   MF_00040
- InterPro:   IPR002661
- InterPro:   IPR015998
- PANTHER:   PTHR20982
- PANTHER:   PTHR20982:SF3
- TIGRFAMs:   TIGR00496

Pfam domain/function: PF01765 RRF; SSF55194 Ribosome_recyc_fac

EC number: NA

Molecular weight: Translated: 21086; Mature: 21086

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKAQETILLIEKKMSQAQEVMLKNFLEIRTGYANPNILNKVNINYYGSQTPLKTLSSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHC
SVSEGTQLQIKPYEKTLIPSIKKAILASDLGITPETDGVLLRLNFPKPTEERRKVLVKEV
CCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
DKLSEQTKVAVRNIRRDANDKIKKLALTKDLEALYLEKIQILTDKNMKMIEKEANNKNKE
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH
LLKF
HHCC
>Mature Secondary Structure
MEQKAQETILLIEKKMSQAQEVMLKNFLEIRTGYANPNILNKVNINYYGSQTPLKTLSSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHC
SVSEGTQLQIKPYEKTLIPSIKKAILASDLGITPETDGVLLRLNFPKPTEERRKVLVKEV
CCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
DKLSEQTKVAVRNIRRDANDKIKKLALTKDLEALYLEKIQILTDKNMKMIEKEANNKNKE
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH
LLKF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA