Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is yaaQ [H]

Identifier: 197294538

GI number: 197294538

Start: 491014

End: 491337

Strand: Direct

Name: yaaQ [H]

Synonym: PAa_0493

Alternate gene names: 197294538

Gene position: 491014-491337 (Clockwise)

Preceding gene: 197294537

Following gene: 197294539

Centisome position: 55.8

GC content: 27.47

Gene sequence:

>324_bases
ATGAAATTAATTATAGCTATTGTTTCTAGTAAAGATGCAAATAAAGTAGAAACTTCTTTAATTGAAAATAGCTTTTTTAC
AACTAAATTGGCTACTCAAGGTGGCTTTTTAAAAGAAAGCAACGATACTTTTATTTTAGGAGTCAAAGAAGAAAAAGTTC
AAAAGGCTTTAGAAATTATTAGTAAACATTCTAAAAAACAAACCCAGATTATTCCTAGAAATATTTTAAATCAGTTTTCG
GCTTATATCTCTTTGCCAACAGAAGTTTCTATCGGAGGGGCCACTGTTTTTATTTTAGATGTGGAACAATTTTTAAAAGT
TTAA

Upstream 100 bases:

>100_bases
TAGCTAATAAATTAAATAAAAGGTAATCATTAAATTTTTAAATTTAGTATTTTTTTCTTTCAAAATTAAAAAAATAAGGT
ATAATATTTTTGTGGATCAT

Downstream 100 bases:

>100_bases
ATTAATAAAAAAGGGGTTAAATTAGTGGCATTAACTAAAAAAGAAAAAGCAGACATCATTAAAGCAACTGCTAGTTTTGA
AAAGAACACTGGTTCTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKLIIAIVSSKDANKVETSLIENSFFTTKLATQGGFLKESNDTFILGVKEEKVQKALEIISKHSKKQTQIIPRNILNQFS
AYISLPTEVSIGGATVFILDVEQFLKV

Sequences:

>Translated_107_residues
MKLIIAIVSSKDANKVETSLIENSFFTTKLATQGGFLKESNDTFILGVKEEKVQKALEIISKHSKKQTQIIPRNILNQFS
AYISLPTEVSIGGATVFILDVEQFLKV
>Mature_107_residues
MKLIIAIVSSKDANKVETSLIENSFFTTKLATQGGFLKESNDTFILGVKEEKVQKALEIISKHSKKQTQIIPRNILNQFS
AYISLPTEVSIGGATVFILDVEQFLKV

Specific function: Unknown

COG id: COG3870

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010375
- InterPro:   IPR011322 [H]

Pfam domain/function: PF06153 DUF970 [H]

EC number: NA

Molecular weight: Translated: 11873; Mature: 11873

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIIAIVSSKDANKVETSLIENSFFTTKLATQGGFLKESNDTFILGVKEEKVQKALEII
CEEEEEEECCCCCCHHHHHHHHCCHHEEEECCCCCEEEECCCEEEEEECHHHHHHHHHHH
SKHSKKQTQIIPRNILNQFSAYISLPTEVSIGGATVFILDVEQFLKV
HHCCCHHHHCCHHHHHHHHHHHCCCCCEEECCCEEEEEEEHHHHHCC
>Mature Secondary Structure
MKLIIAIVSSKDANKVETSLIENSFFTTKLATQGGFLKESNDTFILGVKEEKVQKALEII
CEEEEEEECCCCCCHHHHHHHHCCHHEEEECCCCCEEEECCCEEEEEECHHHHHHHHHHH
SKHSKKQTQIIPRNILNQFSAYISLPTEVSIGGATVFILDVEQFLKV
HHCCCHHHHCCHHHHHHHHHHHCCCCCEEECCCEEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]