| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is znuA [H]
Identifier: 197294526
GI number: 197294526
Start: 476283
End: 477404
Strand: Direct
Name: znuA [H]
Synonym: PAa_0481
Alternate gene names: 197294526
Gene position: 476283-477404 (Clockwise)
Preceding gene: 197294525
Following gene: 197294527
Centisome position: 54.13
GC content: 27.72
Gene sequence:
>1122_bases ATGATTCCTGAAAAAGAAAAAAAACAAAAATTCATTGTTATTTTTTTAATTTTGATAATAACTTTTTTTATTTTGGTGAT TCCTGTTAGTGCTTTTTATTCAAAACCAACAAAACAAGATGAAAACACAAAAAAGATAGTAGTAACAACAACTATGTTAC AAGATTTAGTTAAGCATTTAATCGGTGATGTTGATAAAGAGGAAACTCAAAAATCAGAAACTTATCAAAAAATCGAAGGA ATTACTTGTGAAACTTTAATGGGAGTAGGAATTGATCCTCATAATTATAAAATTAAATTATCAGATCGTTTAAAACTTAA AAATGCTGATTTAGTAGTTGTTAGTGGCCTCCATTTAGAAGCCAAAATGCCTGAAGCTTTTCAACGTTTTACCAAACAGG ATCGCTTTTGGGATGCAGGAAATGCCTTAATTAAAGACTCTGAACTGAAAAATTTATTAAAACAAACAGATTCTTATGAA TACGACCCTCATATTTGGTTTGAAATTGATTTATGGATCGAAACTTTCAAAAACTTAAAACAAACTCTTTTAGACAAAAA AATTGTGAAAGAAAAAGATAAAAAGAAATTAGAGGCTAATTTTGGTATTTACAATAAGGCTTTGGAGCAATTAAAAGAGA AAATAATTAATGAAATGATTGAATTAAAAATAAACCTAAACAACAAACTAATTATAGTTACTGCTCACGATGCTTTTGCT TATTGGGAATCTTTTTGTCAAAAACAAAAAAAAAATTGTGATTTTGATTTAGAATCAATTCAAGGAATTTCTACTCAAAC CGAAGCTAGTAATAATAAAATTGTCGCTTTAGCTGAAAAATTAGTCAAAAACGATGTAAAAGCCATTTTTACTGAATCTT CGATGCCTAAAAATTCTTTACAAAGTTTAAAAGAACAGGTAGATAGCGAAAGAAGACGCAAAGGCCTTCAAGGTGAGATT CAAATTCCTGAAAACATGGAATTATATTCCGATTCCTTAGGAACAGATAAACAACAAGAAGAATTAGAAAATAACAAATA TAAACATTCCACCTATATTGGTGCTTTTTTAAACAATATTAAAGTCATCAAAACCTATTTATCGCCAAAAACCATAACAT AA
Upstream 100 bases:
>100_bases AAGTGATTTTTAAAGAATAAAGATTATTTAATGATTAATTTTTTCCAAAAAAATAATAATAAAAATTTTTAAGAAAGCTC ATCCTTAGAAAGAGTTCAAA
Downstream 100 bases:
>100_bases TAAAAAGACAAAAAATCAATAAAATATAAATATACTTTTTTTACCGTTTGCATTTAACAATTAGAAGTTATTAAAAAATA TCATAACATAATAAAAAGAA
Product: ABC-type Zn/Mn transport system periplasmic component/surface adhesion
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Tromp-1 [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MIPEKEKKQKFIVIFLILIITFFILVIPVSAFYSKPTKQDENTKKIVVTTTMLQDLVKHLIGDVDKEETQKSETYQKIEG ITCETLMGVGIDPHNYKIKLSDRLKLKNADLVVVSGLHLEAKMPEAFQRFTKQDRFWDAGNALIKDSELKNLLKQTDSYE YDPHIWFEIDLWIETFKNLKQTLLDKKIVKEKDKKKLEANFGIYNKALEQLKEKIINEMIELKINLNNKLIIVTAHDAFA YWESFCQKQKKNCDFDLESIQGISTQTEASNNKIVALAEKLVKNDVKAIFTESSMPKNSLQSLKEQVDSERRRKGLQGEI QIPENMELYSDSLGTDKQQEELENNKYKHSTYIGAFLNNIKVIKTYLSPKTIT
Sequences:
>Translated_373_residues MIPEKEKKQKFIVIFLILIITFFILVIPVSAFYSKPTKQDENTKKIVVTTTMLQDLVKHLIGDVDKEETQKSETYQKIEG ITCETLMGVGIDPHNYKIKLSDRLKLKNADLVVVSGLHLEAKMPEAFQRFTKQDRFWDAGNALIKDSELKNLLKQTDSYE YDPHIWFEIDLWIETFKNLKQTLLDKKIVKEKDKKKLEANFGIYNKALEQLKEKIINEMIELKINLNNKLIIVTAHDAFA YWESFCQKQKKNCDFDLESIQGISTQTEASNNKIVALAEKLVKNDVKAIFTESSMPKNSLQSLKEQVDSERRRKGLQGEI QIPENMELYSDSLGTDKQQEELENNKYKHSTYIGAFLNNIKVIKTYLSPKTIT >Mature_373_residues MIPEKEKKQKFIVIFLILIITFFILVIPVSAFYSKPTKQDENTKKIVVTTTMLQDLVKHLIGDVDKEETQKSETYQKIEG ITCETLMGVGIDPHNYKIKLSDRLKLKNADLVVVSGLHLEAKMPEAFQRFTKQDRFWDAGNALIKDSELKNLLKQTDSYE YDPHIWFEIDLWIETFKNLKQTLLDKKIVKEKDKKKLEANFGIYNKALEQLKEKIINEMIELKINLNNKLIIVTAHDAFA YWESFCQKQKKNCDFDLESIQGISTQTEASNNKIVALAEKLVKNDVKAIFTESSMPKNSLQSLKEQVDSERRRKGLQGEI QIPENMELYSDSLGTDKQQEELENNKYKHSTYIGAFLNNIKVIKTYLSPKTIT
Specific function: Part of an ATP-driven transport system troABCD for zinc. Substrate-binding protein involved in the transport of zinc across the cytoplasmic membrane [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 43224; Mature: 43224
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPEKEKKQKFIVIFLILIITFFILVIPVSAFYSKPTKQDENTKKIVVTTTMLQDLVKHL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH IGDVDKEETQKSETYQKIEGITCETLMGVGIDPHNYKIKLSDRLKLKNADLVVVSGLHLE HCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCEEECCCCEEEEECCCCC AKMPEAFQRFTKQDRFWDAGNALIKDSELKNLLKQTDSYEYDPHIWFEIDLWIETFKNLK CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHH QTLLDKKIVKEKDKKKLEANFGIYNKALEQLKEKIINEMIELKINLNNKLIIVTAHDAFA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECHHHH YWESFCQKQKKNCDFDLESIQGISTQTEASNNKIVALAEKLVKNDVKAIFTESSMPKNSL HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH QSLKEQVDSERRRKGLQGEIQIPENMELYSDSLGTDKQQEELENNKYKHSTYIGAFLNNI HHHHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHH KVIKTYLSPKTIT HHHHHHCCCCCCC >Mature Secondary Structure MIPEKEKKQKFIVIFLILIITFFILVIPVSAFYSKPTKQDENTKKIVVTTTMLQDLVKHL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH IGDVDKEETQKSETYQKIEGITCETLMGVGIDPHNYKIKLSDRLKLKNADLVVVSGLHLE HCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCEEECCCCEEEEECCCCC AKMPEAFQRFTKQDRFWDAGNALIKDSELKNLLKQTDSYEYDPHIWFEIDLWIETFKNLK CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHH QTLLDKKIVKEKDKKKLEANFGIYNKALEQLKEKIINEMIELKINLNNKLIIVTAHDAFA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECHHHH YWESFCQKQKKNCDFDLESIQGISTQTEASNNKIVALAEKLVKNDVKAIFTESSMPKNSL HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH QSLKEQVDSERRRKGLQGEIQIPENMELYSDSLGTDKQQEELENNKYKHSTYIGAFLNNI HHHHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHH KVIKTYLSPKTIT HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7768866; 9332349; 9665876; 10400603; 10404217 [H]