Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294505

Identifier: 197294505

GI number: 197294505

Start: 441034

End: 443637

Strand: Direct

Name: 197294505

Synonym: PAa_0446

Alternate gene names: NA

Gene position: 441034-443637 (Clockwise)

Preceding gene: 197294504

Following gene: 197294510

Centisome position: 50.12

GC content: 27.88

Gene sequence:

>2604_bases
ATGGAGCATAAAAATATTCAAAAGATTTTTAAATCTTTTATGTCTCAGAAATTAATTGCTTTCCTAATTCTTTTCTTTAC
AATAATTAATTTCTCTCTTTTTTTAAATCATGCAACAGGAGAATTGCAAGAAATTAGTGATGTTTTAAAACCAAACCAAT
CAATTAATTTAACCACAGAGGAACAAAATAATCCTCAAAAACAATCAGTTTTAAATAAAATCAAAAAAGATGACATTGAG
TTAGACATCAATGATTTTATTATAGAAAAAGAAAACAACAATTCCTTAATCGAATCCGTTGATAATAGCCAAGAATCTCA
AGACACATTATCTTTTCAGGAAGATTCAAATGAATCGACTTCAAATAACACAAAAAAGCATATTAGCACTTTTTTAAAAC
CTGCGGTAACAAAATTGAATCTTACTAGACAAGAAAGCAAATCTCCCCAACAACAATCTGTTTTAAATAAAATATTAGCA
GATGGAAAACAATTAACATTAGATGATGTTTTTATGACTTTCACTACCGCTAAACATTTAGTTGCGTCTTCCCAATTTGG
GTCTAAGAAAGTAAAAGGGAGTGTTATATTTACTTATATAACAGTAGAATTAGATCAAATTAGTAGTTATTTAAAAGACA
AAGATACTAAAGTTATTTTAACTACTCAAGAAAGCCAAAACCCCCAAAAACAATCAGTTTTAGATAAAGTTAAAAAAGCC
TCTGATACCCAAATCAAATTAGATGATATCACAATTACTTTAATTGATGGAAATAAAAAGTTAAAAGTTGCTGCCAAAAC
AAACTCTGAAATCTTAGAAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAAGCGTTAAGTGGATTTTTAAAAGACA
AAGATACTAAAATTATTTTAACTAGTCAAGAAAGTCAAGACCCCCAAAAACAATCAGTTTTAGACAAAGTTAAAAAAGCC
TCTGATAACCAAATCAAATTAGATGATATCACAATTACTTTAATTGATGGAAATAAAAAGTTAAAAGTTGCTGCCAAAAC
AAGCTCTGAAACCTTAGGAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAATCTTTAAGTAATTATTTAAAAGACA
AAGATACCAAAGTTATTTTAACTAGTCAAGAAAGTCAAGACCCCCAAAAACAATCAGTTTTAGACAAAGTTAAAAAAGCC
TCTGATACCCAAATTAAATTAGACGATATCACAATTACTTTAACTGATGGAAATAAAAAGTTAAAAGTTGCTGCAAAAAC
AAACTCTGAAATCTTAGAAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAAGCGTTAAGTGGATTTTTAAAAGACA
AAGATACTAAAATTATTTTAACTAGTCAAGAAAGTCAAGAACCCCAAAAACAATCAGTTTTAGACAAAGTTAAAAAAGCC
TCTGATACCCAAATCAAATTAGATGATATCACAATTACTTTAATTGATGGAAATAAAAAGTTAAAAGTTGCTGCAAAAAC
AAACTCTGAAACCTTAGAAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAATCTTTAAGTAATTATTTAAAAGACA
AAGATACCAAAGTTATTTTAACTAGTCAAGAAAGTCAAGACCCCCAAAAACAATCAGTTTTAGACAAAGTTAAAAAAGCC
TCTGATACCCAAATTAAATTAGACGATATCACAATTACTTTAACTGATGGAAATAAAAAGTTAAAAGTTGCTGCAAAAAC
AAACTCTGAAATCTTAGAAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAAGCGTTAAGTGGATTTTTAAAAGACA
AAGATACTAAAATTATTTTAACTAGTCAAGAAAGTCAAGGGCCTCAAAAACAATCAGTTTTAGACAAAATTAAAAAAGAT
GCTGACACCCAAATCAAATTAGATGATATCACAATTACTTTAACTGATGGAAACAAAAAATTAAAAGTTGTTGTCAAAAC
AAGTTCCGAAACCTTAGAAGGTGAAGTTGAATTTAGTAAAGTTTCCATCACAAAAGCGTTAAGTGGATTTTTAAAAGACA
AAGATACTAAAATTATTTTAACTAGTCAAGAAAGTCAAGGGCCTCAAAAACAATCAGTTTTAGACAAAATTAAAAAAGAT
GCTGACACCCAAATCAAATTAGATGATATCACAATTACTTTAACTGATGGAAACAAAAAATTAAAAGTTGTTGTCAAAAC
AAGTTCCGAAACCTTAGAAGGTGAAGTTGAATTTAGTAATGTTAATATAATGTTTAACAATTGCTTAGAAGATATTTTTT
CCTCCGACCAAAGAAACTTAGGAGAATTAAATGAAAGAAGCCCTAAAGCAATCAGAAAAGCTTTATTGAATAAAAATATC
CCCGGATTAACCAAAGAACAAATAAAAAATTTAAAAATAGAGTTAATTGAAGGAGAAAACCAGGCAGACATTTCATCTTC
TGATTTTAAAGGTTTTGTCAGATTGACTTTCACTTTTAAAACATATATAGGGTTAATATTGTTTATAATTGCAACAATAT
TATTCATTATAATTATGTTTTTAGTGTTTTTTAAAAAATATTAG

Upstream 100 bases:

>100_bases
TACATTTTATTTTTAATTTATTAAGTCTATAAGTTTTTAATCATTTGTTTACCTAAAGAAAGGACTTTTTAATAAAGAAA
GGTCAAAAAATTAATAATTA

Downstream 100 bases:

>100_bases
AGAAGGGAAGGAGAAAAATAAAATAATGAAAAAAACCATCTTTTTAGATGGTTTTTATTATTTTAATGATTCATTTTTTA
TTAGTTTACCAGTTTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 867; Mature: 867

Protein sequence:

>867_residues
MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTEEQNNPQKQSVLNKIKKDDIE
LDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNESTSNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILA
DGKQLTLDDVFMTFTTAKHLVASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA
SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQDPQKQSVLDKVKKA
SDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA
SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA
SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA
SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD
ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD
ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNLGELNERSPKAIRKALLNKNI
PGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFKTYIGLILFIIATILFIIIMFLVFFKKY

Sequences:

>Translated_867_residues
MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTEEQNNPQKQSVLNKIKKDDIE
LDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNESTSNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILA
DGKQLTLDDVFMTFTTAKHLVASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA
SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQDPQKQSVLDKVKKA
SDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA
SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA
SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA
SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD
ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD
ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNLGELNERSPKAIRKALLNKNI
PGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFKTYIGLILFIIATILFIIIMFLVFFKKY
>Mature_867_residues
MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTEEQNNPQKQSVLNKIKKDDIE
LDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNESTSNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILA
DGKQLTLDDVFMTFTTAKHLVASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA
SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQDPQKQSVLDKVKKA
SDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA
SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA
SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA
SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD
ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD
ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNLGELNERSPKAIRKALLNKNI
PGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFKTYIGLILFIIATILFIIIMFLVFFKKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96747; Mature: 96747

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCEEEEEC
EQNNPQKQSVLNKIKKDDIELDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNEST
CCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHCCCCCHHHCCCCCCCCCCCC
SNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILADGKQLTLDDVFMTFTTAKHL
CCCHHHHHHHHHHHHHHHEECCHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH
VASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA
HHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCC
SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIIL
CCCEEEEEEEEEEEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEE
TSQESQDPQKQSVLDKVKKASDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSK
ECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEE
VSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKASDTQIKLDDITITLTDGNKK
EHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEE
LKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA
EEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC
SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVIL
CCCEEEEEEEEEEEEECCCEEEEEEECCCCCEECEEEEEEEHHHHHHHHHHCCCCCEEEE
TSQESQDPQKQSVLDKVKKASDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSK
ECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCCEECCCCHHH
VSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKDADTQIKLDDITITLTDGNKK
HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCE
LKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD
EEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC
ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNL
CCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEHHHHHHHHHCCCCCCC
GELNERSPKAIRKALLNKNIPGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFK
CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHH
TYIGLILFIIATILFIIIMFLVFFKKY
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCEEEEEC
EQNNPQKQSVLNKIKKDDIELDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNEST
CCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHCCCCCHHHCCCCCCCCCCCC
SNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILADGKQLTLDDVFMTFTTAKHL
CCCHHHHHHHHHHHHHHHEECCHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH
VASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA
HHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCC
SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIIL
CCCEEEEEEEEEEEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEE
TSQESQDPQKQSVLDKVKKASDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSK
ECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEE
VSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKASDTQIKLDDITITLTDGNKK
EHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEE
LKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA
EEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC
SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVIL
CCCEEEEEEEEEEEEECCCEEEEEEECCCCCEECEEEEEEEHHHHHHHHHHCCCCCEEEE
TSQESQDPQKQSVLDKVKKASDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSK
ECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCCEECCCCHHH
VSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKDADTQIKLDDITITLTDGNKK
HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCE
LKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD
EEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC
ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNL
CCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEHHHHHHHHHCCCCCCC
GELNERSPKAIRKALLNKNIPGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFK
CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHH
TYIGLILFIIATILFIIIMFLVFFKKY
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA