| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294505
Identifier: 197294505
GI number: 197294505
Start: 441034
End: 443637
Strand: Direct
Name: 197294505
Synonym: PAa_0446
Alternate gene names: NA
Gene position: 441034-443637 (Clockwise)
Preceding gene: 197294504
Following gene: 197294510
Centisome position: 50.12
GC content: 27.88
Gene sequence:
>2604_bases ATGGAGCATAAAAATATTCAAAAGATTTTTAAATCTTTTATGTCTCAGAAATTAATTGCTTTCCTAATTCTTTTCTTTAC AATAATTAATTTCTCTCTTTTTTTAAATCATGCAACAGGAGAATTGCAAGAAATTAGTGATGTTTTAAAACCAAACCAAT CAATTAATTTAACCACAGAGGAACAAAATAATCCTCAAAAACAATCAGTTTTAAATAAAATCAAAAAAGATGACATTGAG TTAGACATCAATGATTTTATTATAGAAAAAGAAAACAACAATTCCTTAATCGAATCCGTTGATAATAGCCAAGAATCTCA AGACACATTATCTTTTCAGGAAGATTCAAATGAATCGACTTCAAATAACACAAAAAAGCATATTAGCACTTTTTTAAAAC CTGCGGTAACAAAATTGAATCTTACTAGACAAGAAAGCAAATCTCCCCAACAACAATCTGTTTTAAATAAAATATTAGCA GATGGAAAACAATTAACATTAGATGATGTTTTTATGACTTTCACTACCGCTAAACATTTAGTTGCGTCTTCCCAATTTGG GTCTAAGAAAGTAAAAGGGAGTGTTATATTTACTTATATAACAGTAGAATTAGATCAAATTAGTAGTTATTTAAAAGACA AAGATACTAAAGTTATTTTAACTACTCAAGAAAGCCAAAACCCCCAAAAACAATCAGTTTTAGATAAAGTTAAAAAAGCC TCTGATACCCAAATCAAATTAGATGATATCACAATTACTTTAATTGATGGAAATAAAAAGTTAAAAGTTGCTGCCAAAAC AAACTCTGAAATCTTAGAAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAAGCGTTAAGTGGATTTTTAAAAGACA AAGATACTAAAATTATTTTAACTAGTCAAGAAAGTCAAGACCCCCAAAAACAATCAGTTTTAGACAAAGTTAAAAAAGCC TCTGATAACCAAATCAAATTAGATGATATCACAATTACTTTAATTGATGGAAATAAAAAGTTAAAAGTTGCTGCCAAAAC AAGCTCTGAAACCTTAGGAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAATCTTTAAGTAATTATTTAAAAGACA AAGATACCAAAGTTATTTTAACTAGTCAAGAAAGTCAAGACCCCCAAAAACAATCAGTTTTAGACAAAGTTAAAAAAGCC TCTGATACCCAAATTAAATTAGACGATATCACAATTACTTTAACTGATGGAAATAAAAAGTTAAAAGTTGCTGCAAAAAC AAACTCTGAAATCTTAGAAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAAGCGTTAAGTGGATTTTTAAAAGACA AAGATACTAAAATTATTTTAACTAGTCAAGAAAGTCAAGAACCCCAAAAACAATCAGTTTTAGACAAAGTTAAAAAAGCC TCTGATACCCAAATCAAATTAGATGATATCACAATTACTTTAATTGATGGAAATAAAAAGTTAAAAGTTGCTGCAAAAAC AAACTCTGAAACCTTAGAAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAATCTTTAAGTAATTATTTAAAAGACA AAGATACCAAAGTTATTTTAACTAGTCAAGAAAGTCAAGACCCCCAAAAACAATCAGTTTTAGACAAAGTTAAAAAAGCC TCTGATACCCAAATTAAATTAGACGATATCACAATTACTTTAACTGATGGAAATAAAAAGTTAAAAGTTGCTGCAAAAAC AAACTCTGAAATCTTAGAAGGTGAAGTTGAGTTTAGTAAAGTTTCCATCACAAAAGCGTTAAGTGGATTTTTAAAAGACA AAGATACTAAAATTATTTTAACTAGTCAAGAAAGTCAAGGGCCTCAAAAACAATCAGTTTTAGACAAAATTAAAAAAGAT GCTGACACCCAAATCAAATTAGATGATATCACAATTACTTTAACTGATGGAAACAAAAAATTAAAAGTTGTTGTCAAAAC AAGTTCCGAAACCTTAGAAGGTGAAGTTGAATTTAGTAAAGTTTCCATCACAAAAGCGTTAAGTGGATTTTTAAAAGACA AAGATACTAAAATTATTTTAACTAGTCAAGAAAGTCAAGGGCCTCAAAAACAATCAGTTTTAGACAAAATTAAAAAAGAT GCTGACACCCAAATCAAATTAGATGATATCACAATTACTTTAACTGATGGAAACAAAAAATTAAAAGTTGTTGTCAAAAC AAGTTCCGAAACCTTAGAAGGTGAAGTTGAATTTAGTAATGTTAATATAATGTTTAACAATTGCTTAGAAGATATTTTTT CCTCCGACCAAAGAAACTTAGGAGAATTAAATGAAAGAAGCCCTAAAGCAATCAGAAAAGCTTTATTGAATAAAAATATC CCCGGATTAACCAAAGAACAAATAAAAAATTTAAAAATAGAGTTAATTGAAGGAGAAAACCAGGCAGACATTTCATCTTC TGATTTTAAAGGTTTTGTCAGATTGACTTTCACTTTTAAAACATATATAGGGTTAATATTGTTTATAATTGCAACAATAT TATTCATTATAATTATGTTTTTAGTGTTTTTTAAAAAATATTAG
Upstream 100 bases:
>100_bases TACATTTTATTTTTAATTTATTAAGTCTATAAGTTTTTAATCATTTGTTTACCTAAAGAAAGGACTTTTTAATAAAGAAA GGTCAAAAAATTAATAATTA
Downstream 100 bases:
>100_bases AGAAGGGAAGGAGAAAAATAAAATAATGAAAAAAACCATCTTTTTAGATGGTTTTTATTATTTTAATGATTCATTTTTTA TTAGTTTACCAGTTTTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTEEQNNPQKQSVLNKIKKDDIE LDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNESTSNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILA DGKQLTLDDVFMTFTTAKHLVASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQDPQKQSVLDKVKKA SDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNLGELNERSPKAIRKALLNKNI PGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFKTYIGLILFIIATILFIIIMFLVFFKKY
Sequences:
>Translated_867_residues MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTEEQNNPQKQSVLNKIKKDDIE LDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNESTSNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILA DGKQLTLDDVFMTFTTAKHLVASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQDPQKQSVLDKVKKA SDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNLGELNERSPKAIRKALLNKNI PGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFKTYIGLILFIIATILFIIIMFLVFFKKY >Mature_867_residues MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTEEQNNPQKQSVLNKIKKDDIE LDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNESTSNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILA DGKQLTLDDVFMTFTTAKHLVASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQDPQKQSVLDKVKKA SDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKA SDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNLGELNERSPKAIRKALLNKNI PGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFKTYIGLILFIIATILFIIIMFLVFFKKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96747; Mature: 96747
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCEEEEEC EQNNPQKQSVLNKIKKDDIELDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNEST CCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHCCCCCHHHCCCCCCCCCCCC SNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILADGKQLTLDDVFMTFTTAKHL CCCHHHHHHHHHHHHHHHEECCHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH VASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA HHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCC SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIIL CCCEEEEEEEEEEEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEE TSQESQDPQKQSVLDKVKKASDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSK ECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEE VSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKASDTQIKLDDITITLTDGNKK EHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEE LKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA EEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVIL CCCEEEEEEEEEEEEECCCEEEEEEECCCCCEECEEEEEEEHHHHHHHHHHCCCCCEEEE TSQESQDPQKQSVLDKVKKASDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSK ECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCCEECCCCHHH VSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKDADTQIKLDDITITLTDGNKK HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCE LKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD EEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNL CCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEHHHHHHHHHCCCCCCC GELNERSPKAIRKALLNKNIPGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFK CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHH TYIGLILFIIATILFIIIMFLVFFKKY HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEHKNIQKIFKSFMSQKLIAFLILFFTIINFSLFLNHATGELQEISDVLKPNQSINLTTE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCEEEEEC EQNNPQKQSVLNKIKKDDIELDINDFIIEKENNNSLIESVDNSQESQDTLSFQEDSNEST CCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHCCCCCHHHCCCCCCCCCCCC SNNTKKHISTFLKPAVTKLNLTRQESKSPQQQSVLNKILADGKQLTLDDVFMTFTTAKHL CCCHHHHHHHHHHHHHHHEECCHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH VASSQFGSKKVKGSVIFTYITVELDQISSYLKDKDTKVILTTQESQNPQKQSVLDKVKKA HHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCC SDTQIKLDDITITLIDGNKKLKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIIL CCCEEEEEEEEEEEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEE TSQESQDPQKQSVLDKVKKASDNQIKLDDITITLIDGNKKLKVAAKTSSETLGGEVEFSK ECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEE VSITKSLSNYLKDKDTKVILTSQESQDPQKQSVLDKVKKASDTQIKLDDITITLTDGNKK EHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEE LKVAAKTNSEILEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQEPQKQSVLDKVKKA EEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC SDTQIKLDDITITLIDGNKKLKVAAKTNSETLEGEVEFSKVSITKSLSNYLKDKDTKVIL CCCEEEEEEEEEEEEECCCEEEEEEECCCCCEECEEEEEEEHHHHHHHHHHCCCCCEEEE TSQESQDPQKQSVLDKVKKASDTQIKLDDITITLTDGNKKLKVAAKTNSEILEGEVEFSK ECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCCEECCCCHHH VSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKDADTQIKLDDITITLTDGNKK HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCE LKVVVKTSSETLEGEVEFSKVSITKALSGFLKDKDTKIILTSQESQGPQKQSVLDKIKKD EEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC ADTQIKLDDITITLTDGNKKLKVVVKTSSETLEGEVEFSNVNIMFNNCLEDIFSSDQRNL CCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEHHHHHHHHHCCCCCCC GELNERSPKAIRKALLNKNIPGLTKEQIKNLKIELIEGENQADISSSDFKGFVRLTFTFK CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHH TYIGLILFIIATILFIIIMFLVFFKKY HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA