| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294423
Identifier: 197294423
GI number: 197294423
Start: 352562
End: 353092
Strand: Direct
Name: 197294423
Synonym: PAa_0338
Alternate gene names: NA
Gene position: 352562-353092 (Clockwise)
Preceding gene: 197294422
Following gene: 197294424
Centisome position: 40.07
GC content: 30.51
Gene sequence:
>531_bases GTGGCTATTAATAATTATTTCTCACGTCAAAAACAAGAAAAAATTAAATTAATGAGCGAAAATGATGCCCTTTTATTTGA AGTAAATAGAATCAGCGGTAACAATGAAGATAAAACCCTTATCCCTTTACCACTACCTAATTTAAATCCAAACAAACATC ATCATGTCGTTACTATTAATCATCAAGCTCTTCTAAACGCAAAAGGATTGGACGTTAGTGTTCCTTTATACCTTAAAATA ACTCCAAAATATGAAACTCATAACACTTTTTCTAATCCTGAAACACTCTTTAATTTAGAAGTTAAAAACAATAACACAAT TTATGATGACACCAAACGCCAACAAATGGTTATCGATAAAGATGGCAAAGGTAATATCAACATTCAAATTAAATTAGAAC AAAACGACTTTGTTAAAGCAACAAATCCACTCTTAACTTTAGTTCTTGACTATGAATTAGTAGATAAAGATGGCAATACG TTGGGTGGCGGTGGCCAAACTATTGAAAACAAAATTAAGCAATTAGCTTAA
Upstream 100 bases:
>100_bases TATTAAAAACAATAACCAAAAACCAAATAACAAAACTAAAAACAAAATTATAATTGTCCTGTCAATTTTAATTTGTTCAT TTTTTGCCATTAGTTCTATT
Downstream 100 bases:
>100_bases TTAAAAGCAATAAGACTAAGTTTTTTAACTTAGTCTTATTTGAGAAAGGAAATAAATTATGGAAATCAAAAACCAACCTT CCGCCAAACCACTTTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MAINNYFSRQKQEKIKLMSENDALLFEVNRISGNNEDKTLIPLPLPNLNPNKHHHVVTINHQALLNAKGLDVSVPLYLKI TPKYETHNTFSNPETLFNLEVKNNNTIYDDTKRQQMVIDKDGKGNINIQIKLEQNDFVKATNPLLTLVLDYELVDKDGNT LGGGGQTIENKIKQLA
Sequences:
>Translated_176_residues MAINNYFSRQKQEKIKLMSENDALLFEVNRISGNNEDKTLIPLPLPNLNPNKHHHVVTINHQALLNAKGLDVSVPLYLKI TPKYETHNTFSNPETLFNLEVKNNNTIYDDTKRQQMVIDKDGKGNINIQIKLEQNDFVKATNPLLTLVLDYELVDKDGNT LGGGGQTIENKIKQLA >Mature_175_residues AINNYFSRQKQEKIKLMSENDALLFEVNRISGNNEDKTLIPLPLPNLNPNKHHHVVTINHQALLNAKGLDVSVPLYLKIT PKYETHNTFSNPETLFNLEVKNNNTIYDDTKRQQMVIDKDGKGNINIQIKLEQNDFVKATNPLLTLVLDYELVDKDGNTL GGGGQTIENKIKQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19949; Mature: 19818
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINNYFSRQKQEKIKLMSENDALLFEVNRISGNNEDKTLIPLPLPNLNPNKHHHVVTIN CCCCHHHHHHHHHHEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEC HQALLNAKGLDVSVPLYLKITPKYETHNTFSNPETLFNLEVKNNNTIYDDTKRQQMVIDK HHHEEECCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEEEEC DGKGNINIQIKLEQNDFVKATNPLLTLVLDYELVDKDGNTLGGGGQTIENKIKQLA CCCCCEEEEEEECCCCCEEECCCEEEEEEEEEEECCCCCEECCCCHHHHHHHHHCC >Mature Secondary Structure AINNYFSRQKQEKIKLMSENDALLFEVNRISGNNEDKTLIPLPLPNLNPNKHHHVVTIN CCCHHHHHHHHHHEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEC HQALLNAKGLDVSVPLYLKITPKYETHNTFSNPETLFNLEVKNNNTIYDDTKRQQMVIDK HHHEEECCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEEEEC DGKGNINIQIKLEQNDFVKATNPLLTLVLDYELVDKDGNTLGGGGQTIENKIKQLA CCCCCEEEEEEECCCCCEEECCCEEEEEEEEEEECCCCCEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA