| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294416
Identifier: 197294416
GI number: 197294416
Start: 349903
End: 350343
Strand: Direct
Name: 197294416
Synonym: PAa_0331
Alternate gene names: NA
Gene position: 349903-350343 (Clockwise)
Preceding gene: 197294415
Following gene: 197294417
Centisome position: 39.76
GC content: 26.53
Gene sequence:
>441_bases ATGTTTATTTTTTCACTTTTTACAACAATTCTGAACTTCTTTTTGAAATACACCAAAGGCTTCAACACCAAAGAAATCTT GGAAAGAAGACTAGATTCAATACAGACGGTAATTTTTACAATATTAATTGTTTCTGGGTTCAAACCAATTTTTAAATTAA TTGCAAACACTTTAAATTTCGTCAAAGATTTAATTTTGGGCATCTTTTTCCCCAACAAAAAACTAAAAAACTTAGAAATC CAAAATGCCAAACAAGAATATTTAGAAAAACAATTATTAAAAAAACTAGATAAAATCAATGAAAACCAAGAAAAAATCCA ATCCCAAATAGAAATGCAAAGAATTAAAGTTTCTCATTGGCAAGAGAAAAAAGCAAGAAAAAAACAACTAAAATCGCAAA ACATCAACCCAATTATTAAGAATGAGGAAGAAAATGAATGA
Upstream 100 bases:
>100_bases TATTGCAGTGCAGACGCCGCCTCAATAAAAAAACCTATCAAAAAAACTCAAATCAAAGGCCATCCAAAATGGTCTTTTTT TATGAAGAAAGGAAGCCTCA
Downstream 100 bases:
>100_bases TCTAAATTTCGCCATCGGATTTATCAAAGAGAGAACAAGAAGAAATCAATAAACTAAAAAATAGTTGGAAAAAAAGTTTA GAACTTTTAAAAAACAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MFIFSLFTTILNFFLKYTKGFNTKEILERRLDSIQTVIFTILIVSGFKPIFKLIANTLNFVKDLILGIFFPNKKLKNLEI QNAKQEYLEKQLLKKLDKINENQEKIQSQIEMQRIKVSHWQEKKARKKQLKSQNINPIIKNEEENE
Sequences:
>Translated_146_residues MFIFSLFTTILNFFLKYTKGFNTKEILERRLDSIQTVIFTILIVSGFKPIFKLIANTLNFVKDLILGIFFPNKKLKNLEI QNAKQEYLEKQLLKKLDKINENQEKIQSQIEMQRIKVSHWQEKKARKKQLKSQNINPIIKNEEENE >Mature_146_residues MFIFSLFTTILNFFLKYTKGFNTKEILERRLDSIQTVIFTILIVSGFKPIFKLIANTLNFVKDLILGIFFPNKKLKNLEI QNAKQEYLEKQLLKKLDKINENQEKIQSQIEMQRIKVSHWQEKKARKKQLKSQNINPIIKNEEENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17434; Mature: 17434
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIFSLFTTILNFFLKYTKGFNTKEILERRLDSIQTVIFTILIVSGFKPIFKLIANTLNF CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VKDLILGIFFPNKKLKNLEIQNAKQEYLEKQLLKKLDKINENQEKIQSQIEMQRIKVSHW HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QEKKARKKQLKSQNINPIIKNEEENE HHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MFIFSLFTTILNFFLKYTKGFNTKEILERRLDSIQTVIFTILIVSGFKPIFKLIANTLNF CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VKDLILGIFFPNKKLKNLEIQNAKQEYLEKQLLKKLDKINENQEKIQSQIEMQRIKVSHW HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QEKKARKKQLKSQNINPIIKNEEENE HHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA