Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is 197294399

Identifier: 197294399

GI number: 197294399

Start: 338327

End: 338614

Strand: Reverse

Name: 197294399

Synonym: PAa_0313

Alternate gene names: NA

Gene position: 338614-338327 (Counterclockwise)

Preceding gene: 197294400

Following gene: 197294398

Centisome position: 38.48

GC content: 19.1

Gene sequence:

>288_bases
ATGAAACAACTCAAAAAACAATTTAAATCAGTTCCTTATTTAATTAGTATTATTATTTGTTTAATTGGTGTTATTATAAC
AATAGCCATTACTTTTTATTTCAATAATCATAATAATTTAAAAGAACATATCAATTTGAAAAGCGAACATTTAGAAAAAA
ATATTAAGGATTTCAAACAAGAAACTAAAAATAATTTCGATAAAACAGACAAAAAACTTGATAAATTAGACAAAAAACTG
GATGAATTAGATGATAAAAAGATTAATAAAAATAATAAGGAAATATAG

Upstream 100 bases:

>100_bases
AAGAAAAAGAATATAGAAATCAAACAAAACTCCCTCAACAATCTTTACGAAATCTCCTCAACTGAGGAATAAAAAATAAA
TAAAAAAAGAGGTTTTAAAA

Downstream 100 bases:

>100_bases
GAGATTTATATTAATAAATGAATTTAAAACAAAGTTTATCTAAATACATGAATATATTTTATATTTTAATTATAACTTTA
TTTAGTATTATAATTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKQLKKQFKSVPYLISIIICLIGVIITIAITFYFNNHNNLKEHINLKSEHLEKNIKDFKQETKNNFDKTDKKLDKLDKKL
DELDDKKINKNNKEI

Sequences:

>Translated_95_residues
MKQLKKQFKSVPYLISIIICLIGVIITIAITFYFNNHNNLKEHINLKSEHLEKNIKDFKQETKNNFDKTDKKLDKLDKKL
DELDDKKINKNNKEI
>Mature_95_residues
MKQLKKQFKSVPYLISIIICLIGVIITIAITFYFNNHNNLKEHINLKSEHLEKNIKDFKQETKNNFDKTDKKLDKLDKKL
DELDDKKINKNNKEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11316; Mature: 11316

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLKKQFKSVPYLISIIICLIGVIITIAITFYFNNHNNLKEHINLKSEHLEKNIKDFKQ
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHH
ETKNNFDKTDKKLDKLDKKLDELDDKKINKNNKEI
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKQLKKQFKSVPYLISIIICLIGVIITIAITFYFNNHNNLKEHINLKSEHLEKNIKDFKQ
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHH
ETKNNFDKTDKKLDKLDKKLDELDDKKINKNNKEI
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA