| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is artI [H]
Identifier: 197294378
GI number: 197294378
Start: 296511
End: 297575
Strand: Reverse
Name: artI [H]
Synonym: PAa_0267
Alternate gene names: 197294378
Gene position: 297575-296511 (Counterclockwise)
Preceding gene: 197294379
Following gene: 197294377
Centisome position: 33.82
GC content: 25.26
Gene sequence:
>1065_bases TTGCCTGCTGTATTAGATTTAATTAAAAAAGGCAACACTGATGCTTTTGTCAATGACACTCCTGTTATTCAAAATATTGT CAATAATTTTCCTAATGATTTTGCAAGTGTTGAATTAAATAATAATGTCTTTGGTGATTTAAAACCTTTTGGTCTTTTTG TTAATTCTTCCTACCCAAATAAAGCCAAAATTAAAGAAGCTTTATTAAAAGTTTTAGATTTAAATACAAAACCTTTAAAA TCAGAAGATGAAATTGATGCCATATCAGATGCATATAAAGACATTTTTTTGAATAAAGCTATTAAAAATTATCAACAAAT ACAACAAAAACTAAAAAATCAAAAACCCTTTCCAGGATTTATCAAGTTAACTAAAAAAATATGGTCCACTTTGCCAACTT ACAAAAAAGGTTTTATTACTTCTTTCATCATTTCCATAGATAGCGTTATTTTAGGTTTTCTTTTAGCTTTGATATTTGTC AAAACCAAGACATTAATTAAACACTATCAAAAAACAAACCAAAAAAATTTAATGCGTGTTTATCGAACTTTTTCTTTTTT CATTAACAAAACAATCAGTTTTTTAAATGCTATTCCTTTAACAATTCAAGCATTATTGGTTTTTAATCTTTTCAATTTAT TTCAAATATTAAGAAATAATACAATGAACTTTTATGCCGCTTTGTTTGTTCTTGTTTTAAATACAGCCGCCAATTTAGTT AAAATTATGATGCATAATATTAAAATATTGTCTCAAGGACAAATTGAGGCAGGATACGCATTAGGAATGAGCCATAAACA AGTTTTTCACTATATTATTTTCGAACAAGGGATTAAAAGATCTTATCCTTCTGTGGGACAACAATTTATCAATAATATCA AAAATACATCTTTATTCCAAATTATTGGTTTATCAAGTCTTTTATTGCAAGCTCAAAGAAATACAACTCTAGATTTTGAT TTATGGACTCCTTATATTATAGTTTGTGCCATTTATTTAATTATTGTTTTTATTACCAATTTTATTTTAGATAAAATCAA AAAACAAAACAAAATTGAGTTTTAG
Upstream 100 bases:
>100_bases AATAATTACTTTTCCAAGTTCTCTTTATGTTCAAAAATTAAAAGAATATTTCGAAAATAACCCAAAATTTCAAGTAGATG AAAATAATTTTAGAGATAAT
Downstream 100 bases:
>100_bases AAGTAATTAATTCAAAGCTTTTTTAACGCTTGCAGTTTAGTTTTTGAAAATTTTTTTCATTGTTGCTTTTTTGAGACAAC TTTTTTATTTTTTCTTGCAA
Product: ABC-type arginine transport system,permease component
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPAVLDLIKKGNTDAFVNDTPVIQNIVNNFPNDFASVELNNNVFGDLKPFGLFVNSSYPNKAKIKEALLKVLDLNTKPLK SEDEIDAISDAYKDIFLNKAIKNYQQIQQKLKNQKPFPGFIKLTKKIWSTLPTYKKGFITSFIISIDSVILGFLLALIFV KTKTLIKHYQKTNQKNLMRVYRTFSFFINKTISFLNAIPLTIQALLVFNLFNLFQILRNNTMNFYAALFVLVLNTAANLV KIMMHNIKILSQGQIEAGYALGMSHKQVFHYIIFEQGIKRSYPSVGQQFINNIKNTSLFQIIGLSSLLLQAQRNTTLDFD LWTPYIIVCAIYLIIVFITNFILDKIKKQNKIEF
Sequences:
>Translated_354_residues MPAVLDLIKKGNTDAFVNDTPVIQNIVNNFPNDFASVELNNNVFGDLKPFGLFVNSSYPNKAKIKEALLKVLDLNTKPLK SEDEIDAISDAYKDIFLNKAIKNYQQIQQKLKNQKPFPGFIKLTKKIWSTLPTYKKGFITSFIISIDSVILGFLLALIFV KTKTLIKHYQKTNQKNLMRVYRTFSFFINKTISFLNAIPLTIQALLVFNLFNLFQILRNNTMNFYAALFVLVLNTAANLV KIMMHNIKILSQGQIEAGYALGMSHKQVFHYIIFEQGIKRSYPSVGQQFINNIKNTSLFQIIGLSSLLLQAQRNTTLDFD LWTPYIIVCAIYLIIVFITNFILDKIKKQNKIEF >Mature_353_residues PAVLDLIKKGNTDAFVNDTPVIQNIVNNFPNDFASVELNNNVFGDLKPFGLFVNSSYPNKAKIKEALLKVLDLNTKPLKS EDEIDAISDAYKDIFLNKAIKNYQQIQQKLKNQKPFPGFIKLTKKIWSTLPTYKKGFITSFIISIDSVILGFLLALIFVK TKTLIKHYQKTNQKNLMRVYRTFSFFINKTISFLNAIPLTIQALLVFNLFNLFQILRNNTMNFYAALFVLVLNTAANLVK IMMHNIKILSQGQIEAGYALGMSHKQVFHYIIFEQGIKRSYPSVGQQFINNIKNTSLFQIIGLSSLLLQAQRNTTLDFDL WTPYIIVCAIYLIIVFITNFILDKIKKQNKIEF
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=180, Percent_Identity=30.5555555555556, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1787087, Length=123, Percent_Identity=30.8943089430894, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788226, Length=220, Percent_Identity=25.9090909090909, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 40605; Mature: 40474
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVLDLIKKGNTDAFVNDTPVIQNIVNNFPNDFASVELNNNVFGDLKPFGLFVNSSYPN CCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHEEEEECCCCC KAKIKEALLKVLDLNTKPLKSEDEIDAISDAYKDIFLNKAIKNYQQIQQKLKNQKPFPGF HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH IKLTKKIWSTLPTYKKGFITSFIISIDSVILGFLLALIFVKTKTLIKHYQKTNQKNLMRV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH YRTFSFFINKTISFLNAIPLTIQALLVFNLFNLFQILRNNTMNFYAALFVLVLNTAANLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KIMMHNIKILSQGQIEAGYALGMSHKQVFHYIIFEQGIKRSYPSVGQQFINNIKNTSLFQ HHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH IIGLSSLLLQAQRNTTLDFDLWTPYIIVCAIYLIIVFITNFILDKIKKQNKIEF HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PAVLDLIKKGNTDAFVNDTPVIQNIVNNFPNDFASVELNNNVFGDLKPFGLFVNSSYPN CHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHEEEEECCCCC KAKIKEALLKVLDLNTKPLKSEDEIDAISDAYKDIFLNKAIKNYQQIQQKLKNQKPFPGF HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH IKLTKKIWSTLPTYKKGFITSFIISIDSVILGFLLALIFVKTKTLIKHYQKTNQKNLMRV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH YRTFSFFINKTISFLNAIPLTIQALLVFNLFNLFQILRNNTMNFYAALFVLVLNTAANLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KIMMHNIKILSQGQIEAGYALGMSHKQVFHYIIFEQGIKRSYPSVGQQFINNIKNTSLFQ HHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH IIGLSSLLLQAQRNTTLDFDLWTPYIIVCAIYLIIVFITNFILDKIKKQNKIEF HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]