| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294361
Identifier: 197294361
GI number: 197294361
Start: 277207
End: 278289
Strand: Direct
Name: 197294361
Synonym: PAa_0238
Alternate gene names: NA
Gene position: 277207-278289 (Clockwise)
Preceding gene: 197294360
Following gene: 197294363
Centisome position: 31.5
GC content: 29.18
Gene sequence:
>1083_bases ATGGAGTTATTTAAAGTATTAGTTATTATAGGTATTTTAGGAGTTTTTTTTGGATTGGGCCCTTTATTGATTTGGTTTGT TCAAAAACACGTAAATAATAAATTAAACAATGTAGAAAATATTAAATTAAAAATTGAAGTTGAGATAATAACTAAGCAAA AGAAATTAAACCAAAAAATATCTGAGTTAGTAAATAATAAATCTTTATCAGTTCAAGAAAAAACTGAATTACAAGAAGAA ATAAATACTATTCAAACTGAATTAAACCAAAAACAAGCAGAATTATCACATAATCAAATGTTGACAGGAAAATTAAAAGC TAAAAAATATACAAAAAGAAATCCAATAAAAGCTATAATTATATATTATATTATCATGCTTTGTATAATTGCTATTTTTG GTGGTTTTATATTTTTAGACAATAAATACGATATAACAAATTCAAAACCCAAAACTTATACTATTTCTGAACCGAAAGTA GAAATTGAATCTGAATGGTTTGAAGGATACCGTTCTAGAGATGATAACTACCGAATTAAGAAATATTATAAAGCAGATGG TTATGACCCCAATGCAGAATTTGGGGCCACAAAAGATTGGAAAGGTAGTCCTTGTCAAAGTTATAGTCATGATGTTAATC ACCTTGTTTTGGGCCACCAAATGATTAAAGTAAAATACACTTTCTACGGCCTCAACGGCCTTGGTCGCGGACAGCACCGC GAATACGAGCCAAATGATATAATGCCGTTTATGAAAAACCCTTTTGAGAAATGGGAAGTAAAAGATAGCAGGATTGATTT TTTTAATACTTTCCATACAAGAGATAAAGGTGATGATTCATATTTCGGTGATATAAATTTTGGCAACAACTATGTAGACC ACTACATGTACCTCGACTACGAAGACCCGAAATGGTTAATTGAAGAAGATAAAGACTTCTTCATGGATGAAGTACAATGT CATATAATAAACCCCAAAGATTCTAGATATCCCAAAGATAAAAAGAAAAATTACTACCTTCACTTCAACCCAAAACAAAG ATATATCACGCTTTACACTAAGAAATTTAATACAAAAAATTAA
Upstream 100 bases:
>100_bases AACATGGTTTGGTCGGTAATGCAATTTTTTTGCATTACCAGATTAGATTATGATACAATGATGATAAGTTATAAAAATAA AAAAGGAAGTTAATTATAGG
Downstream 100 bases:
>100_bases TAAATATTTTAAAACAACAATAAAATTTCTTAAAAAGATTTTATTGTTGTTTTTTTTAATTAAAACCAACTAAACAGTTT TTTTAACAATAAAGGCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVEIITKQKKLNQKISELVNNKSLSVQEKTELQEE INTIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYRIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGQHR EYEPNDIMPFMKNPFEKWEVKDSRIDFFNTFHTRDKGDDSYFGDINFGNNYVDHYMYLDYEDPKWLIEEDKDFFMDEVQC HIINPKDSRYPKDKKKNYYLHFNPKQRYITLYTKKFNTKN
Sequences:
>Translated_360_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVEIITKQKKLNQKISELVNNKSLSVQEKTELQEE INTIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYRIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGQHR EYEPNDIMPFMKNPFEKWEVKDSRIDFFNTFHTRDKGDDSYFGDINFGNNYVDHYMYLDYEDPKWLIEEDKDFFMDEVQC HIINPKDSRYPKDKKKNYYLHFNPKQRYITLYTKKFNTKN >Mature_360_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVEIITKQKKLNQKISELVNNKSLSVQEKTELQEE INTIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYRIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGQHR EYEPNDIMPFMKNPFEKWEVKDSRIDFFNTFHTRDKGDDSYFGDINFGNNYVDHYMYLDYEDPKWLIEEDKDFFMDEVQC HIINPKDSRYPKDKKKNYYLHFNPKQRYITLYTKKFNTKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42810; Mature: 42810
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVEIITKQKKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHH SELVNNKSLSVQEKTELQEEINTIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAII HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHCCCCCHHHHH IYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKVEIESEWFEGYRSRDDNYRIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEECHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGQHR EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEEEEECCCCCCCCCC EYEPNDIMPFMKNPFEKWEVKDSRIDFFNTFHTRDKGDDSYFGDINFGNNYVDHYMYLDY CCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCEECEEEEEEE EDPKWLIEEDKDFFMDEVQCHIINPKDSRYPKDKKKNYYLHFNPKQRYITLYTKKFNTKN CCCCEEECCCHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCC >Mature Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLKIEVEIITKQKKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHH SELVNNKSLSVQEKTELQEEINTIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAII HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHCCCCCHHHHH IYYIIMLCIIAIFGGFIFLDNKYDITNSKPKTYTISEPKVEIESEWFEGYRSRDDNYRIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEECHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGQHR EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEEEEECCCCCCCCCC EYEPNDIMPFMKNPFEKWEVKDSRIDFFNTFHTRDKGDDSYFGDINFGNNYVDHYMYLDY CCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCEECEEEEEEE EDPKWLIEEDKDFFMDEVQCHIINPKDSRYPKDKKKNYYLHFNPKQRYITLYTKKFNTKN CCCCEEECCCHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA