| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294344
Identifier: 197294344
GI number: 197294344
Start: 257960
End: 258541
Strand: Reverse
Name: 197294344
Synonym: PAa_0219
Alternate gene names: NA
Gene position: 258541-257960 (Counterclockwise)
Preceding gene: 197294345
Following gene: 197294342
Centisome position: 29.38
GC content: 29.04
Gene sequence:
>582_bases ATGGAAGAACAACAAAAGAAAAAAATACTAGTTAGTTCAGCTGTTGCAGTTGTTTTAGCGGTAGTAATAGCGGTTTTAGT TTGGCTTATGTTTTTTAAGAAAATACAACTAAGCAATGTATTAAAAACTAATACAGAAAAAATTACTTTAACCCAAGGAG AAATAACTACTCCTCAACAAGATTCTGTTTTAAACAAAGTTAAAAAAAATGCTGATAGCCAAGTTAAATTAGCGGACATT ACAATTACTTTAACTGATGAAAGTAAAAAACTAAAAGTGGCTGCTAAAGATTCTAGTAAATTTCAAGGACATGTTGAATA TAATTTAGTACAAGCTTCACAAGCAGCACCAGCTAAAGTAGAATTAAATACTGTTTTAAAACCAGCTTCAGAAAAAATTA CTTTAACCCAAGGAGAAATAACTACTCCTCAACAAGATTCTGTTTTAAACAAAGTTAAAAAAAATGCTGATAGCCAAGTT AAATTAGCTGATGTAACATTAACTGTAGCTGACAATAAATTAAAAGTGACAGCTAATGGCTCTAGCCAATTTAAAGGTTT TGTTGAATATAATTTATCATAA
Upstream 100 bases:
>100_bases TGATTGAATGATTTTTTTTGATAAATTAAGCAATTTTTTTGATAATCTTTAAAAAAATAAAATTAATTTTTGACAAACAA AAGAAAAAAAGGAGACAAAA
Downstream 100 bases:
>100_bases TAAACAACTAAATTTAACTTAAACATAACAAAAAAGATAAAAACGAAGATTAAAAAAACTAGTTTAACAAAAGATTAAAA AATACTTCCCAAAAGGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MEEQQKKKILVSSAVAVVLAVVIAVLVWLMFFKKIQLSNVLKTNTEKITLTQGEITTPQQDSVLNKVKKNADSQVKLADI TITLTDESKKLKVAAKDSSKFQGHVEYNLVQASQAAPAKVELNTVLKPASEKITLTQGEITTPQQDSVLNKVKKNADSQV KLADVTLTVADNKLKVTANGSSQFKGFVEYNLS
Sequences:
>Translated_193_residues MEEQQKKKILVSSAVAVVLAVVIAVLVWLMFFKKIQLSNVLKTNTEKITLTQGEITTPQQDSVLNKVKKNADSQVKLADI TITLTDESKKLKVAAKDSSKFQGHVEYNLVQASQAAPAKVELNTVLKPASEKITLTQGEITTPQQDSVLNKVKKNADSQV KLADVTLTVADNKLKVTANGSSQFKGFVEYNLS >Mature_193_residues MEEQQKKKILVSSAVAVVLAVVIAVLVWLMFFKKIQLSNVLKTNTEKITLTQGEITTPQQDSVLNKVKKNADSQVKLADI TITLTDESKKLKVAAKDSSKFQGHVEYNLVQASQAAPAKVELNTVLKPASEKITLTQGEITTPQQDSVLNKVKKNADSQV KLADVTLTVADNKLKVTANGSSQFKGFVEYNLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21071; Mature: 21071
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEQQKKKILVSSAVAVVLAVVIAVLVWLMFFKKIQLSNVLKTNTEKITLTQGEITTPQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH DSVLNKVKKNADSQVKLADITITLTDESKKLKVAAKDSSKFQGHVEYNLVQASQAAPAKV HHHHHHHHCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEE ELNTVLKPASEKITLTQGEITTPQQDSVLNKVKKNADSQVKLADVTLTVADNKLKVTANG EEHEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEEECC SSQFKGFVEYNLS CCCCEEEEEEECC >Mature Secondary Structure MEEQQKKKILVSSAVAVVLAVVIAVLVWLMFFKKIQLSNVLKTNTEKITLTQGEITTPQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH DSVLNKVKKNADSQVKLADITITLTDESKKLKVAAKDSSKFQGHVEYNLVQASQAAPAKV HHHHHHHHCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEE ELNTVLKPASEKITLTQGEITTPQQDSVLNKVKKNADSQVKLADVTLTVADNKLKVTANG EEHEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEEECC SSQFKGFVEYNLS CCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA