| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is 197294320
Identifier: 197294320
GI number: 197294320
Start: 223698
End: 224780
Strand: Reverse
Name: 197294320
Synonym: PAa_0186
Alternate gene names: NA
Gene position: 224780-223698 (Counterclockwise)
Preceding gene: 197294321
Following gene: 197294319
Centisome position: 25.54
GC content: 27.7
Gene sequence:
>1083_bases ATGGAGTTATTTAAAGCATTAGTTATTATAGGTATTTTGGGTTTTCTTTTTGGATTGGGTCCTATTTTAATATATTTTAT CCAAAAACACGTAAATAATAAATTAAATAATGTAGAAAATATTAAATTACAAACTGAAATTGAGACAATAACTAAGCAAG GAAAATTAAACCAAAAAATAGCTGAGTTAGTAAATAATAAAGCTTTATCAGTTCAAGAAAAAACTGAATTACAAGAAGAA ATAAATACTATTCAAAACGAATTAAACCAAAAAAAAGCAGAATTATCACATAATCAAATGTTGGCAGGACAATTAAAAGC TAAAAAATATAAAAAAAGAAATCCAATAAAAGCTATAATTATATATTATTGTTTTATAATAAGTATATTTGCTATTTTCG GTGGTTTTATATTTTTAGACAATAAATACGATATAACAAATTCAAAACCCAAAACTTATACTATTACTGAACCTAAAATA GAAATTGAATCTGAATGGTTTGAAGGATACCGTTCTAGAGATGATAACTATCAAATTAAGAAATATTATAAAGCAGATGG TTATGACCCCAATGCAGAATTTGGGGCCACAAAAGATTGGAAAGGTAGTCCTTGTCAAAGTTATAGTCATAATGTTAATC ACCTTGTTTTGGGTCACCAAATAATTAAAGTAAAATACACTTTCTACGGTCTCAATGGCCTTGGTCGCGGACAGCACCGT GAATACGAGCCAACTGATATAATGCCGTTTATGAAAAATCCTTTTGACAAATGGGAAGTAAAAGACAGCAGGATTGATTT TTTTAAAACTTTCCATACGAAAAATAAAAATGATGATTCACAATTTAATAATATGTTTATCAACGACCCTTCAAACCACT ACACAAAACTCAACTACAAAGGCCCGAAATGGTTAATTGAAGAAGATAAAGATTTTTTCATGGATGAAGTACAATGTCAT ATAATAGACCCCAAAGATTCTAGATATCCCAAAGATGAAAAGAAAAATTACTACCTTCACTTCAACCCAAAACAAAGATA TATCACACTTTACACTAAGAAATTTAATACTAAAAATAATTAA
Upstream 100 bases:
>100_bases AACATGGTTTGGTCGGTAATGCAATTTTTTTGCATTACCAGATTGGATTATGATACAATGATGATAAGTTATAAAAATAA AAAAGGAAGTTAATTATAGG
Downstream 100 bases:
>100_bases AATAAATAAAAATAAGGAGTTTAATAATTAATGTTTAAATTACAAAATCAATTAAAAATAATAAGTATTTGTTTATTAGC TTTTTTAGGGATGTTATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MELFKALVIIGILGFLFGLGPILIYFIQKHVNNKLNNVENIKLQTEIETITKQGKLNQKIAELVNNKALSVQEKTELQEE INTIQNELNQKKAELSHNQMLAGQLKAKKYKKRNPIKAIIIYYCFIISIFAIFGGFIFLDNKYDITNSKPKTYTITEPKI EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHNVNHLVLGHQIIKVKYTFYGLNGLGRGQHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFKTFHTKNKNDDSQFNNMFINDPSNHYTKLNYKGPKWLIEEDKDFFMDEVQCH IIDPKDSRYPKDEKKNYYLHFNPKQRYITLYTKKFNTKNN
Sequences:
>Translated_360_residues MELFKALVIIGILGFLFGLGPILIYFIQKHVNNKLNNVENIKLQTEIETITKQGKLNQKIAELVNNKALSVQEKTELQEE INTIQNELNQKKAELSHNQMLAGQLKAKKYKKRNPIKAIIIYYCFIISIFAIFGGFIFLDNKYDITNSKPKTYTITEPKI EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHNVNHLVLGHQIIKVKYTFYGLNGLGRGQHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFKTFHTKNKNDDSQFNNMFINDPSNHYTKLNYKGPKWLIEEDKDFFMDEVQCH IIDPKDSRYPKDEKKNYYLHFNPKQRYITLYTKKFNTKNN >Mature_360_residues MELFKALVIIGILGFLFGLGPILIYFIQKHVNNKLNNVENIKLQTEIETITKQGKLNQKIAELVNNKALSVQEKTELQEE INTIQNELNQKKAELSHNQMLAGQLKAKKYKKRNPIKAIIIYYCFIISIFAIFGGFIFLDNKYDITNSKPKTYTITEPKI EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHNVNHLVLGHQIIKVKYTFYGLNGLGRGQHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFKTFHTKNKNDDSQFNNMFINDPSNHYTKLNYKGPKWLIEEDKDFFMDEVQCH IIDPKDSRYPKDEKKNYYLHFNPKQRYITLYTKKFNTKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42597; Mature: 42597
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFKALVIIGILGFLFGLGPILIYFIQKHVNNKLNNVENIKLQTEIETITKQGKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCHHHHH AELVNNKALSVQEKTELQEEINTIQNELNQKKAELSHNQMLAGQLKAKKYKKRNPIKAII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IYYCFIISIFAIFGGFIFLDNKYDITNSKPKTYTITEPKIEIESEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEECHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHNVNHLVLGHQIIKVKYTFYGLNGLGRGQHR EEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECEEEEEEEEEEEECCCCCCCCCC EYEPTDIMPFMKNPFDKWEVKDSRIDFFKTFHTKNKNDDSQFNNMFINDPSNHYTKLNYK CCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCEEEECCCCCEEEEECC GPKWLIEEDKDFFMDEVQCHIIDPKDSRYPKDEKKNYYLHFNPKQRYITLYTKKFNTKNN CCCEEECCCHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCC >Mature Secondary Structure MELFKALVIIGILGFLFGLGPILIYFIQKHVNNKLNNVENIKLQTEIETITKQGKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCHHHHH AELVNNKALSVQEKTELQEEINTIQNELNQKKAELSHNQMLAGQLKAKKYKKRNPIKAII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IYYCFIISIFAIFGGFIFLDNKYDITNSKPKTYTITEPKIEIESEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEECHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHNVNHLVLGHQIIKVKYTFYGLNGLGRGQHR EEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECEEEEEEEEEEEECCCCCCCCCC EYEPTDIMPFMKNPFDKWEVKDSRIDFFKTFHTKNKNDDSQFNNMFINDPSNHYTKLNYK CCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCEEEECCCCCEEEEECC GPKWLIEEDKDFFMDEVQCHIIDPKDSRYPKDEKKNYYLHFNPKQRYITLYTKKFNTKNN CCCEEECCCHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA