| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294291
Identifier: 197294291
GI number: 197294291
Start: 182702
End: 183595
Strand: Direct
Name: 197294291
Synonym: PAa_0154
Alternate gene names: NA
Gene position: 182702-183595 (Clockwise)
Preceding gene: 197294290
Following gene: 197294294
Centisome position: 20.76
GC content: 35.79
Gene sequence:
>894_bases ATGGAACCAATAAACAATAAAGAAACTGTATATAATAAAAATGGATCAGTTGCTGGTACCAATGAATATAACCCCCTAAC AGGCAACAAGACCAAATACATCACTCATCACCCCGATGGCTCAGTTGATTGCATTATTGAATTTGACCCAACCACAAGAA ATCGAACCAAATACACCAAATTTACTGAATACAACCCCGAAAGCAAAGATATTTGGGCTAAAAGAGATGCAATCATTTGT ATCAGAGAATACAACCTTGAAACAGGTAAACAAATCAAACACACCCAATACTTCCCCAATGGAGAAACAATTTGGTATAT CAAAGAATATAACCCCCAAACAGGTGCATTAATCAAAGAGACCAAATACAACGAATACGATATCAATGAAGCTAACAAAA TCGCTAAAGACGTCTTTGCATACAACCCCCAAACAAACCAAAAGACTAAGTTAACTACATACAAAAAAGACGGTACGATT GATGATATAACTGAATATGAATACGACCCTCGAACAGGCAAACGCATCAAATGGAGCTTTCGTTCATACAATTTCGACGG TAAAACAATTAGATACATTGAGGAATATGATCCTGAAACAGGTAAAAAAATCAAAGAAACTCAATATGACAAAGATGGAT TTTGGTTCACCAATGAATACGATCGCACAACAGGGAACCGAATCAAACAAATCCAACACGATCCTGATAGCAAACGAATT TTTTGTATCATCTACTATGACCCTCATACAGGCGAAGTAACCAATCAATACTTTTACGACACCAATGCAACTAGATACAA CAGGATGCAAGGTTCGACTAATCCACAAAAATGGATTATTGGTACGGGTATTGTATTTGGTGTGATACTTGTAATAAAAA TGATAATGATGTAA
Upstream 100 bases:
>100_bases TTCACCTACATATCCACAATATCCACCAAGATATTAAAACAGATAAAAAAATAAAGCATTTTTTTAGAAATACAAAATAA AATCAAAGGAACGGAAAAAA
Downstream 100 bases:
>100_bases ATAAAATAATCAATATCAAATACAATCACCAAACAGGTGAAAAAAATAGTTGTTAAATTCGGAGTTCCTTGCACTTTCAA AGCATCTGTTTCCGAAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MEPINNKETVYNKNGSVAGTNEYNPLTGNKTKYITHHPDGSVDCIIEFDPTTRNRTKYTKFTEYNPESKDIWAKRDAIIC IREYNLETGKQIKHTQYFPNGETIWYIKEYNPQTGALIKETKYNEYDINEANKIAKDVFAYNPQTNQKTKLTTYKKDGTI DDITEYEYDPRTGKRIKWSFRSYNFDGKTIRYIEEYDPETGKKIKETQYDKDGFWFTNEYDRTTGNRIKQIQHDPDSKRI FCIIYYDPHTGEVTNQYFYDTNATRYNRMQGSTNPQKWIIGTGIVFGVILVIKMIMM
Sequences:
>Translated_297_residues MEPINNKETVYNKNGSVAGTNEYNPLTGNKTKYITHHPDGSVDCIIEFDPTTRNRTKYTKFTEYNPESKDIWAKRDAIIC IREYNLETGKQIKHTQYFPNGETIWYIKEYNPQTGALIKETKYNEYDINEANKIAKDVFAYNPQTNQKTKLTTYKKDGTI DDITEYEYDPRTGKRIKWSFRSYNFDGKTIRYIEEYDPETGKKIKETQYDKDGFWFTNEYDRTTGNRIKQIQHDPDSKRI FCIIYYDPHTGEVTNQYFYDTNATRYNRMQGSTNPQKWIIGTGIVFGVILVIKMIMM >Mature_297_residues MEPINNKETVYNKNGSVAGTNEYNPLTGNKTKYITHHPDGSVDCIIEFDPTTRNRTKYTKFTEYNPESKDIWAKRDAIIC IREYNLETGKQIKHTQYFPNGETIWYIKEYNPQTGALIKETKYNEYDINEANKIAKDVFAYNPQTNQKTKLTTYKKDGTI DDITEYEYDPRTGKRIKWSFRSYNFDGKTIRYIEEYDPETGKKIKETQYDKDGFWFTNEYDRTTGNRIKQIQHDPDSKRI FCIIYYDPHTGEVTNQYFYDTNATRYNRMQGSTNPQKWIIGTGIVFGVILVIKMIMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35108; Mature: 35108
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPINNKETVYNKNGSVAGTNEYNPLTGNKTKYITHHPDGSVDCIIEFDPTTRNRTKYTK CCCCCCCCEEEECCCCEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEE FTEYNPESKDIWAKRDAIICIREYNLETGKQIKHTQYFPNGETIWYIKEYNPQTGALIKE EECCCCCCCCEEECCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEE TKYNEYDINEANKIAKDVFAYNPQTNQKTKLTTYKKDGTIDDITEYEYDPRTGKRIKWSF CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCEEEEEE RSYNFDGKTIRYIEEYDPETGKKIKETQYDKDGFWFTNEYDRTTGNRIKQIQHDPDSKRI EEECCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCEE FCIIYYDPHTGEVTNQYFYDTNATRYNRMQGSTNPQKWIIGTGIVFGVILVIKMIMM EEEEEECCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHC >Mature Secondary Structure MEPINNKETVYNKNGSVAGTNEYNPLTGNKTKYITHHPDGSVDCIIEFDPTTRNRTKYTK CCCCCCCCEEEECCCCEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEE FTEYNPESKDIWAKRDAIICIREYNLETGKQIKHTQYFPNGETIWYIKEYNPQTGALIKE EECCCCCCCCEEECCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEE TKYNEYDINEANKIAKDVFAYNPQTNQKTKLTTYKKDGTIDDITEYEYDPRTGKRIKWSF CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCEEEEEE RSYNFDGKTIRYIEEYDPETGKKIKETQYDKDGFWFTNEYDRTTGNRIKQIQHDPDSKRI EEECCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCEE FCIIYYDPHTGEVTNQYFYDTNATRYNRMQGSTNPQKWIIGTGIVFGVILVIKMIMM EEEEEECCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA