Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294240

Identifier: 197294240

GI number: 197294240

Start: 108185

End: 108766

Strand: Direct

Name: 197294240

Synonym: PAa_0098

Alternate gene names: NA

Gene position: 108185-108766 (Clockwise)

Preceding gene: 197294239

Following gene: 197294241

Centisome position: 12.29

GC content: 22.68

Gene sequence:

>582_bases
ATGAATAAATTTAGAATTAGAAAAGGATCAAAAGATTTATTTATAAGTATTTTATGCTTATTAGTTTCTTTTTTTTGCTT
CTTCGAGACATCTTTTTCAGTTGCTCAAATTGAAATTAAATTAGCAGATATTTTTTTAGGTGTCATTTTATTTTTATTTA
CTTATTTATTGGTTTTTAAAGAATATAAAACAATTAATACTAAAAGCCGTTATGTTTTTCTCTTTGAAACTCTTTTGTTT
ATTTCTATTATTTTGATGAGTTTTATTTTTCCAGGCATGGGATTAATAAAAAAAGAACAGCTGCCTTCGGTTTTTGCTTG
GTTTTTGGAATGGAATCATTGTTTATTTTACCTTGTTGTTGTTCACACTTTCATTAAATTACACGTTGAATATTTCAAAA
AAGAAAAAAACTTATCTTTTTCTTTATACCTTATTGCTTTTGGTTTTGGCAATTATATAATGAATAGTCCAATTAATCCT
AGAAACTTTATTTTGAAGACAATATCTGTTTTATCTCTTTTACAATGTCTTTATTTTCTTTTTACAAGTATTAAAAAAAT
GAAAAATAATAATCAAAAATAA

Upstream 100 bases:

>100_bases
AAAGAAAACAATTAAAGAAAACAATAAATAATTTTTTGTTTCAAAAATGATTTTCAAAATAACAAAAATAACAAAATAAG
TTAAAATAAGGAGAAATTTT

Downstream 100 bases:

>100_bases
CTTTTGAATTCAATAATTTATTTTTTTGTTGGAAATGTTTCAATTTAGGTTCATTATTAATAAAAATACAAACATTAAAA
TTTATTTTAAATCTTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNKFRIRKGSKDLFISILCLLVSFFCFFETSFSVAQIEIKLADIFLGVILFLFTYLLVFKEYKTINTKSRYVFLFETLLF
ISIILMSFIFPGMGLIKKEQLPSVFAWFLEWNHCLFYLVVVHTFIKLHVEYFKKEKNLSFSLYLIAFGFGNYIMNSPINP
RNFILKTISVLSLLQCLYFLFTSIKKMKNNNQK

Sequences:

>Translated_193_residues
MNKFRIRKGSKDLFISILCLLVSFFCFFETSFSVAQIEIKLADIFLGVILFLFTYLLVFKEYKTINTKSRYVFLFETLLF
ISIILMSFIFPGMGLIKKEQLPSVFAWFLEWNHCLFYLVVVHTFIKLHVEYFKKEKNLSFSLYLIAFGFGNYIMNSPINP
RNFILKTISVLSLLQCLYFLFTSIKKMKNNNQK
>Mature_193_residues
MNKFRIRKGSKDLFISILCLLVSFFCFFETSFSVAQIEIKLADIFLGVILFLFTYLLVFKEYKTINTKSRYVFLFETLLF
ISIILMSFIFPGMGLIKKEQLPSVFAWFLEWNHCLFYLVVVHTFIKLHVEYFKKEKNLSFSLYLIAFGFGNYIMNSPINP
RNFILKTISVLSLLQCLYFLFTSIKKMKNNNQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22878; Mature: 22878

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFRIRKGSKDLFISILCLLVSFFCFFETSFSVAQIEIKLADIFLGVILFLFTYLLVFK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYKTINTKSRYVFLFETLLFISIILMSFIFPGMGLIKKEQLPSVFAWFLEWNHCLFYLVV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VHTFIKLHVEYFKKEKNLSFSLYLIAFGFGNYIMNSPINPRNFILKTISVLSLLQCLYFL
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FTSIKKMKNNNQK
HHHHHHHHCCCCC
>Mature Secondary Structure
MNKFRIRKGSKDLFISILCLLVSFFCFFETSFSVAQIEIKLADIFLGVILFLFTYLLVFK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYKTINTKSRYVFLFETLLFISIILMSFIFPGMGLIKKEQLPSVFAWFLEWNHCLFYLVV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VHTFIKLHVEYFKKEKNLSFSLYLIAFGFGNYIMNSPINPRNFILKTISVLSLLQCLYFL
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FTSIKKMKNNNQK
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA