Click here to switch to the map view.

The map label for this gene is degV

Identifier: 197294233

GI number: 197294233

Start: 99914

End: 100780

Strand: Direct

Name: degV

Synonym: PAa_0091

Alternate gene names: NA

Gene position: 99914-100780 (Clockwise)

Preceding gene: 197294232

Following gene: 197294234

Centisome position: 11.35

GC content: 28.49

Gene sequence:

>867_bases
ATGAAAAAAAGAAAATTAGGAATAATAGTTGATTCTACTTGCGGAAGTGATTATGGAAAAAGCTTTTTCCCAGATATTTC
CGTAGTCCCTTTAACTATAATAGTTGATGGAAAAAGTTATGTTGATGGCGATTTTGATAACAAAACATTATTGCATTTTA
TCGATCAAAAGAAAAAAGTAACAACGAGCCAACCCAACCCTGAACTTTTTATTCAAGCTTTTAAAAAACAATTTTCTTTA
GGTTATGAACATGTTTTTTGCTTTACTTTATCGCATAAATTAAGTGGTACTTTTAATAGCGCCCTTTTAGCGAAAAAGAT
ATTAAATGATGAAAGAATTACTATCATTGATAGCGAAACTGTTGGACCTGGAGTTATTTTTGCCCTGAAAAGACTTTCTT
ATTTACTAGAGCAAGAAACATTTGACAGTTATCAAGCCTTAGAATTTCAGCTGAAACAAGAATTAGACCAAGGTTTTTTA
TTATTTTATATCGAAAACTTAAAACAATTAGTTAAAAACGGACGTATTAGTAAGTTTAAAGCCCTTATTGGTACTTTATT
TAAAATCCATCCGATTGTTAAATATCAAAAAAGTGTTTTAATGATTAATAAGAAAATAAGAAATTTTAATAGATGTTTTG
AATATTTAATTCAAAGTGTTTTAAATGAAAAAACTATTAACAAAGCCCTAGATATACAAACAGTTCATGTTGACGAAGAT
AGCCAAACGAAAGCTTTTTTGCAAAAAATTAACGATTTAAATGAATCTCAAATTACAGTTTCTGATTATGGTGCCATTTC
TTCTGTGGTTGCAGTTCATATGGGTTCCAAAGCATTTGGTTTTTATCTGAATACAATCAAAGCATAA

Upstream 100 bases:

>100_bases
TTAGAAGGAATTATGATTAAAATAAACTTAAAAACCAAACTTCAAGAATATCTTGCTATTTTTATGAACTAAAATGAACT
AAAAGCGAAAGGAGAAAAAA

Downstream 100 bases:

>100_bases
ATATAAATTATTTTACTATCTTTATTTTCAAAAAACTTTTATTTTAATTATTCTTTAAAATTTAAAATCAGTTAGATATT
TCCATTAAAAATAAAAATAA

Product: Uncharacterised BCR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKRKLGIIVDSTCGSDYGKSFFPDISVVPLTIIVDGKSYVDGDFDNKTLLHFIDQKKKVTTSQPNPELFIQAFKKQFSL
GYEHVFCFTLSHKLSGTFNSALLAKKILNDERITIIDSETVGPGVIFALKRLSYLLEQETFDSYQALEFQLKQELDQGFL
LFYIENLKQLVKNGRISKFKALIGTLFKIHPIVKYQKSVLMINKKIRNFNRCFEYLIQSVLNEKTINKALDIQTVHVDED
SQTKAFLQKINDLNESQITVSDYGAISSVVAVHMGSKAFGFYLNTIKA

Sequences:

>Translated_288_residues
MKKRKLGIIVDSTCGSDYGKSFFPDISVVPLTIIVDGKSYVDGDFDNKTLLHFIDQKKKVTTSQPNPELFIQAFKKQFSL
GYEHVFCFTLSHKLSGTFNSALLAKKILNDERITIIDSETVGPGVIFALKRLSYLLEQETFDSYQALEFQLKQELDQGFL
LFYIENLKQLVKNGRISKFKALIGTLFKIHPIVKYQKSVLMINKKIRNFNRCFEYLIQSVLNEKTINKALDIQTVHVDED
SQTKAFLQKINDLNESQITVSDYGAISSVVAVHMGSKAFGFYLNTIKA
>Mature_288_residues
MKKRKLGIIVDSTCGSDYGKSFFPDISVVPLTIIVDGKSYVDGDFDNKTLLHFIDQKKKVTTSQPNPELFIQAFKKQFSL
GYEHVFCFTLSHKLSGTFNSALLAKKILNDERITIIDSETVGPGVIFALKRLSYLLEQETFDSYQALEFQLKQELDQGFL
LFYIENLKQLVKNGRISKFKALIGTLFKIHPIVKYQKSVLMINKKIRNFNRCFEYLIQSVLNEKTINKALDIQTVHVDED
SQTKAFLQKINDLNESQITVSDYGAISSVVAVHMGSKAFGFYLNTIKA

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 32765; Mature: 32765

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRKLGIIVDSTCGSDYGKSFFPDISVVPLTIIVDGKSYVDGDFDNKTLLHFIDQKKKV
CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCC
TTSQPNPELFIQAFKKQFSLGYEHVFCFTLSHKLSGTFNSALLAKKILNDERITIIDSET
CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCHHHHHHHHHHCCCCEEEEEECCC
VGPGVIFALKRLSYLLEQETFDSYQALEFQLKQELDQGFLLFYIENLKQLVKNGRISKFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH
ALIGTLFKIHPIVKYQKSVLMINKKIRNFNRCFEYLIQSVLNEKTINKALDIQTVHVDED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
SQTKAFLQKINDLNESQITVSDYGAISSVVAVHMGSKAFGFYLNTIKA
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKRKLGIIVDSTCGSDYGKSFFPDISVVPLTIIVDGKSYVDGDFDNKTLLHFIDQKKKV
CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCC
TTSQPNPELFIQAFKKQFSLGYEHVFCFTLSHKLSGTFNSALLAKKILNDERITIIDSET
CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCHHHHHHHHHHCCCCEEEEEECCC
VGPGVIFALKRLSYLLEQETFDSYQALEFQLKQELDQGFLLFYIENLKQLVKNGRISKFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH
ALIGTLFKIHPIVKYQKSVLMINKKIRNFNRCFEYLIQSVLNEKTINKALDIQTVHVDED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
SQTKAFLQKINDLNESQITVSDYGAISSVVAVHMGSKAFGFYLNTIKA
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]